RNA–Protein interactions for RNA: ENST00000628477.2

DDX46-212, Transcript of DEAD-box helicase 46, humanhuman

TSL 5 BASIC

Gene DDX46, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-212ENST00000628477 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
DDX46-212ENST00000628477 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
DDX46-212ENST00000628477 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
DDX46-212ENST00000628477 ABCC9O60706 1549 aa26.21■■□□□ 1.79
DDX46-212ENST00000628477 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
DDX46-212ENST00000628477 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.77
DDX46-212ENST00000628477 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
DDX46-212ENST00000628477 NACADO15069 1562 aa25.74■■□□□ 1.71
DDX46-212ENST00000628477 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
DDX46-212ENST00000628477 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
DDX46-212ENST00000628477 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
DDX46-212ENST00000628477 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
DDX46-212ENST00000628477 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
DDX46-212ENST00000628477 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
DDX46-212ENST00000628477 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
DDX46-212ENST00000628477 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
DDX46-212ENST00000628477 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
DDX46-212ENST00000628477 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
DDX46-212ENST00000628477 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
DDX46-212ENST00000628477 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
DDX46-212ENST00000628477 WIZO95785 1651 aa24.22■■□□□ 1.47
DDX46-212ENST00000628477 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
DDX46-212ENST00000628477 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
DDX46-212ENST00000628477 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
DDX46-212ENST00000628477 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
DDX46-212ENST00000628477 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
DDX46-212ENST00000628477 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
DDX46-212ENST00000628477 NCAPD3P42695 1498 aa23.78■■□□□ 1.4
DDX46-212ENST00000628477 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
DDX46-212ENST00000628477 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
DDX46-212ENST00000628477 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
DDX46-212ENST00000628477 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
DDX46-212ENST00000628477 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
DDX46-212ENST00000628477 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
DDX46-212ENST00000628477 CFTRP13569 1480 aa23.22■■□□□ 1.31
DDX46-212ENST00000628477 ABCC8Q09428 1581 aa23.19■■□□□ 1.3
DDX46-212ENST00000628477 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
DDX46-212ENST00000628477 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
DDX46-212ENST00000628477 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
DDX46-212ENST00000628477 NESP48681 1621 aa22.99■■□□□ 1.27
DDX46-212ENST00000628477 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
DDX46-212ENST00000628477 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
DDX46-212ENST00000628477 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
DDX46-212ENST00000628477 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
DDX46-212ENST00000628477 CUX1P39880 1505 aa22.86■■□□□ 1.25
DDX46-212ENST00000628477 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
DDX46-212ENST00000628477 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
DDX46-212ENST00000628477 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
DDX46-212ENST00000628477 SOGA1O94964 1423 aa22.75■■□□□ 1.23
DDX46-212ENST00000628477 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
DDX46-212ENST00000628477 LOC105371045A0A1W2PR82 267 aa22.74■■□□□ 1.23
DDX46-212ENST00000628477 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
DDX46-212ENST00000628477 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
DDX46-212ENST00000628477 EEA1Q15075 1411 aa22.66■■□□□ 1.22
DDX46-212ENST00000628477 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
DDX46-212ENST00000628477 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
DDX46-212ENST00000628477 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
DDX46-212ENST00000628477 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
DDX46-212ENST00000628477 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
DDX46-212ENST00000628477 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
DDX46-212ENST00000628477 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
DDX46-212ENST00000628477 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
DDX46-212ENST00000628477 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
DDX46-212ENST00000628477 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
DDX46-212ENST00000628477 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
DDX46-212ENST00000628477 CUX2O14529 1486 aa22.45■■□□□ 1.18
DDX46-212ENST00000628477 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
DDX46-212ENST00000628477 WDR62O43379 1518 aa22.39■■□□□ 1.17
DDX46-212ENST00000628477 KIF21BO75037 1637 aa22.37■■□□□ 1.17
DDX46-212ENST00000628477 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
DDX46-212ENST00000628477 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
DDX46-212ENST00000628477 IGF1RP08069 1367 aa22.33■■□□□ 1.17
DDX46-212ENST00000628477 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
DDX46-212ENST00000628477 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
DDX46-212ENST00000628477 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
DDX46-212ENST00000628477 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
DDX46-212ENST00000628477 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
DDX46-212ENST00000628477 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
DDX46-212ENST00000628477 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
DDX46-212ENST00000628477 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
DDX46-212ENST00000628477 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
DDX46-212ENST00000628477 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
DDX46-212ENST00000628477 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
DDX46-212ENST00000628477 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
DDX46-212ENST00000628477 CEP162Q5TB80 1403 aa22.14■■□□□ 1.14
DDX46-212ENST00000628477 AQRO60306 1485 aaKnown RBP eCLIP22.13■■□□□ 1.134e-8■■■■■ 31
DDX46-212ENST00000628477 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
DDX46-212ENST00000628477 CUL7Q14999 1698 aa22.1■■□□□ 1.13
DDX46-212ENST00000628477 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
DDX46-212ENST00000628477 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
DDX46-212ENST00000628477 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
DDX46-212ENST00000628477 CLIP1P30622 1438 aa21.99■■□□□ 1.11
DDX46-212ENST00000628477 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
DDX46-212ENST00000628477 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
DDX46-212ENST00000628477 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
DDX46-212ENST00000628477 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
DDX46-212ENST00000628477 MAGI1Q96QZ7 1491 aaPredicted RBP21.85■■□□□ 1.09
DDX46-212ENST00000628477 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
DDX46-212ENST00000628477 ARHGAP35Q9NRY4 1499 aa21.81■■□□□ 1.08
DDX46-212ENST00000628477 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms