RNA–Protein interactions for RNA: ENST00000523851.1

SREK1-214, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-214ENST00000523851 NISCHQ9Y2I1 1504 aa40.71■■■■■ 4.11
SREK1-214ENST00000523851 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.43
SREK1-214ENST00000523851 ABCC9O60706 1549 aa36.49■■■■□ 3.43
SREK1-214ENST00000523851 RB1CC1Q8TDY2 1594 aa34.74■■■■□ 3.15
SREK1-214ENST00000523851 NACADO15069 1562 aa34.52■■■■□ 3.12
SREK1-214ENST00000523851 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
SREK1-214ENST00000523851 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
SREK1-214ENST00000523851 MYO15BQ96JP2 1530 aa34.06■■■■□ 3.04
SREK1-214ENST00000523851 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
SREK1-214ENST00000523851 PABPN1Q86U42 306 aaKnown RBP eCLIP33.99■■■■□ 3.03
SREK1-214ENST00000523851 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
SREK1-214ENST00000523851 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
SREK1-214ENST00000523851 DCAF1Q9Y4B6 1507 aa33.63■■■□□ 2.97
SREK1-214ENST00000523851 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.92
SREK1-214ENST00000523851 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
SREK1-214ENST00000523851 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
SREK1-214ENST00000523851 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
SREK1-214ENST00000523851 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
SREK1-214ENST00000523851 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
SREK1-214ENST00000523851 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
SREK1-214ENST00000523851 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
SREK1-214ENST00000523851 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
SREK1-214ENST00000523851 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
SREK1-214ENST00000523851 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
SREK1-214ENST00000523851 ERCC6Q03468 1493 aa31.47■■■□□ 2.63
SREK1-214ENST00000523851 PEG3Q9GZU2 1588 aa31.45■■■□□ 2.63
SREK1-214ENST00000523851 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
SREK1-214ENST00000523851 DNAJC5Q9H3Z4 198 aa31.44■■■□□ 2.62
SREK1-214ENST00000523851 CUX2O14529 1486 aa31.44■■■□□ 2.62
SREK1-214ENST00000523851 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
SREK1-214ENST00000523851 NESP48681 1621 aa31.37■■■□□ 2.61
SREK1-214ENST00000523851 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
SREK1-214ENST00000523851 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
SREK1-214ENST00000523851 WIZO95785 1651 aa31■■■□□ 2.55
SREK1-214ENST00000523851 KIF21AQ7Z4S6 1674 aa30.97■■■□□ 2.55
SREK1-214ENST00000523851 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.54
SREK1-214ENST00000523851 CADPSQ9ULU8 1353 aa30.91■■■□□ 2.54
SREK1-214ENST00000523851 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
SREK1-214ENST00000523851 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
SREK1-214ENST00000523851 WDR62O43379 1518 aa30.62■■■□□ 2.49
SREK1-214ENST00000523851 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
SREK1-214ENST00000523851 CFTRP13569 1480 aa30.56■■■□□ 2.48
SREK1-214ENST00000523851 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
SREK1-214ENST00000523851 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
SREK1-214ENST00000523851 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
SREK1-214ENST00000523851 CCDC88BA6NC98 1476 aa30.27■■■□□ 2.44
SREK1-214ENST00000523851 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
SREK1-214ENST00000523851 OSCARQ8IYS5 282 aa30.03■■■□□ 2.4
SREK1-214ENST00000523851 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
SREK1-214ENST00000523851 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
SREK1-214ENST00000523851 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
SREK1-214ENST00000523851 ZNF608Q9ULD9 1512 aaPredicted RBP29.93■■■□□ 2.38
SREK1-214ENST00000523851 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
SREK1-214ENST00000523851 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
SREK1-214ENST00000523851 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
SREK1-214ENST00000523851 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
SREK1-214ENST00000523851 AQRO60306 1485 aaKnown RBP eCLIP29.66■■■□□ 2.348e-7■□□□□ 8.6
SREK1-214ENST00000523851 POLA1P09884 1462 aaPredicted RBP29.66■■■□□ 2.34
SREK1-214ENST00000523851 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
SREK1-214ENST00000523851 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
SREK1-214ENST00000523851 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
SREK1-214ENST00000523851 RAD54L2Q9Y4B4 1467 aa29.57■■■□□ 2.32
SREK1-214ENST00000523851 CHD1O14646 1710 aa29.54■■■□□ 2.32
SREK1-214ENST00000523851 SOGA1O94964 1423 aa29.54■■■□□ 2.32
SREK1-214ENST00000523851 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
SREK1-214ENST00000523851 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
SREK1-214ENST00000523851 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
SREK1-214ENST00000523851 CUX1P39880 1505 aa29.46■■■□□ 2.31
SREK1-214ENST00000523851 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
SREK1-214ENST00000523851 FBLN2P98095 1184 aa29.44■■■□□ 2.3
SREK1-214ENST00000523851 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
SREK1-214ENST00000523851 SNAPC4Q5SXM2 1469 aa29.33■■■□□ 2.29
SREK1-214ENST00000523851 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
SREK1-214ENST00000523851 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
SREK1-214ENST00000523851 MAGI1Q96QZ7 1491 aaPredicted RBP29.26■■■□□ 2.27
SREK1-214ENST00000523851 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
SREK1-214ENST00000523851 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
SREK1-214ENST00000523851 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
SREK1-214ENST00000523851 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
SREK1-214ENST00000523851 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
SREK1-214ENST00000523851 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
SREK1-214ENST00000523851 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
SREK1-214ENST00000523851 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
SREK1-214ENST00000523851 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
SREK1-214ENST00000523851 WRNQ14191 1432 aaPredicted RBP eCLIP29.02■■■□□ 2.24
SREK1-214ENST00000523851 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
SREK1-214ENST00000523851 TOP2BQ02880 1626 aa29■■■□□ 2.23
SREK1-214ENST00000523851 TRHP20396 242 aaPredicted RBP28.97■■■□□ 2.23
SREK1-214ENST00000523851 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
SREK1-214ENST00000523851 ADAMTS12P58397 1594 aa28.87■■■□□ 2.21
SREK1-214ENST00000523851 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
SREK1-214ENST00000523851 NUP160Q12769 1436 aa28.8■■■□□ 2.2
SREK1-214ENST00000523851 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
SREK1-214ENST00000523851 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
SREK1-214ENST00000523851 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
SREK1-214ENST00000523851 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
SREK1-214ENST00000523851 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
SREK1-214ENST00000523851 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
SREK1-214ENST00000523851 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
SREK1-214ENST00000523851 IGF1RP08069 1367 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms