RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
RPUSD1-204ENST00000563560 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
RPUSD1-204ENST00000563560 ABCC9O60706 1549 aa32.11■■■□□ 2.73
RPUSD1-204ENST00000563560 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
RPUSD1-204ENST00000563560 NACADO15069 1562 aa30.83■■■□□ 2.53
RPUSD1-204ENST00000563560 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
RPUSD1-204ENST00000563560 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
RPUSD1-204ENST00000563560 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
RPUSD1-204ENST00000563560 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
RPUSD1-204ENST00000563560 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
RPUSD1-204ENST00000563560 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
RPUSD1-204ENST00000563560 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
RPUSD1-204ENST00000563560 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
RPUSD1-204ENST00000563560 DNAJC5BQ9UF47 199 aa29.72■■■□□ 2.35
RPUSD1-204ENST00000563560 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
RPUSD1-204ENST00000563560 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
RPUSD1-204ENST00000563560 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
RPUSD1-204ENST00000563560 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
RPUSD1-204ENST00000563560 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
RPUSD1-204ENST00000563560 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
RPUSD1-204ENST00000563560 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
RPUSD1-204ENST00000563560 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
RPUSD1-204ENST00000563560 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
RPUSD1-204ENST00000563560 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
RPUSD1-204ENST00000563560 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
RPUSD1-204ENST00000563560 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
RPUSD1-204ENST00000563560 BAZ1BQ9UIG0 1483 aaKnown RBP28.12■■■□□ 2.09
RPUSD1-204ENST00000563560 WIZO95785 1651 aa28.05■■■□□ 2.08
RPUSD1-204ENST00000563560 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
RPUSD1-204ENST00000563560 NESP48681 1621 aa27.81■■■□□ 2.04
RPUSD1-204ENST00000563560 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
RPUSD1-204ENST00000563560 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
RPUSD1-204ENST00000563560 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
RPUSD1-204ENST00000563560 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
RPUSD1-204ENST00000563560 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
RPUSD1-204ENST00000563560 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
RPUSD1-204ENST00000563560 CUX2O14529 1486 aa27.5■■□□□ 1.99
RPUSD1-204ENST00000563560 CFTRP13569 1480 aa27.43■■□□□ 1.98
RPUSD1-204ENST00000563560 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
RPUSD1-204ENST00000563560 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
RPUSD1-204ENST00000563560 PRDM2Q13029 1718 aa27.33■■□□□ 1.96
RPUSD1-204ENST00000563560 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
RPUSD1-204ENST00000563560 WDR62O43379 1518 aa27.23■■□□□ 1.95
RPUSD1-204ENST00000563560 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
RPUSD1-204ENST00000563560 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
RPUSD1-204ENST00000563560 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
RPUSD1-204ENST00000563560 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
RPUSD1-204ENST00000563560 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
RPUSD1-204ENST00000563560 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
RPUSD1-204ENST00000563560 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
RPUSD1-204ENST00000563560 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
RPUSD1-204ENST00000563560 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
RPUSD1-204ENST00000563560 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
RPUSD1-204ENST00000563560 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
RPUSD1-204ENST00000563560 CUX1P39880 1505 aa26.6■■□□□ 1.85
RPUSD1-204ENST00000563560 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
RPUSD1-204ENST00000563560 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
RPUSD1-204ENST00000563560 FGD5Q6ZNL6 1462 aa26.48■■□□□ 1.83
RPUSD1-204ENST00000563560 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
RPUSD1-204ENST00000563560 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
RPUSD1-204ENST00000563560 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
RPUSD1-204ENST00000563560 SOGA1O94964 1423 aa26.39■■□□□ 1.81
RPUSD1-204ENST00000563560 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.818e-8■■■■■ 39.5
RPUSD1-204ENST00000563560 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
RPUSD1-204ENST00000563560 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
RPUSD1-204ENST00000563560 WRNQ14191 1432 aaPredicted RBP eCLIP26.26■■□□□ 1.79
RPUSD1-204ENST00000563560 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
RPUSD1-204ENST00000563560 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
RPUSD1-204ENST00000563560 CHD1O14646 1710 aa26.25■■□□□ 1.79
RPUSD1-204ENST00000563560 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
RPUSD1-204ENST00000563560 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
RPUSD1-204ENST00000563560 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
RPUSD1-204ENST00000563560 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
RPUSD1-204ENST00000563560 SNAPC4Q5SXM2 1469 aa26.13■■□□□ 1.77
RPUSD1-204ENST00000563560 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
RPUSD1-204ENST00000563560 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
RPUSD1-204ENST00000563560 SYNJ2O15056 1496 aa26■■□□□ 1.75
RPUSD1-204ENST00000563560 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
RPUSD1-204ENST00000563560 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
RPUSD1-204ENST00000563560 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
RPUSD1-204ENST00000563560 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
RPUSD1-204ENST00000563560 ADAMTS12P58397 1594 aa25.95■■□□□ 1.75
RPUSD1-204ENST00000563560 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
RPUSD1-204ENST00000563560 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
RPUSD1-204ENST00000563560 FBLN2P98095 1184 aa25.87■■□□□ 1.73
RPUSD1-204ENST00000563560 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
RPUSD1-204ENST00000563560 GRIN2AQ12879 1464 aa25.83■■□□□ 1.73
RPUSD1-204ENST00000563560 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
RPUSD1-204ENST00000563560 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
RPUSD1-204ENST00000563560 NUP160Q12769 1436 aa25.77■■□□□ 1.72
RPUSD1-204ENST00000563560 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
RPUSD1-204ENST00000563560 IGF1RP08069 1367 aa25.69■■□□□ 1.7
RPUSD1-204ENST00000563560 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
RPUSD1-204ENST00000563560 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
RPUSD1-204ENST00000563560 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
RPUSD1-204ENST00000563560 CUL7Q14999 1698 aa25.66■■□□□ 1.7
RPUSD1-204ENST00000563560 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
RPUSD1-204ENST00000563560 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
RPUSD1-204ENST00000563560 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
RPUSD1-204ENST00000563560 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms