Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.36■□□□□ 0.696e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-211ENST00000613811 1744 ntTSL 1 (best)34.17■■■■□ 3.061e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.591e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.64■□□□□ 0.571e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-208ENST00000543876 560 ntTSL 417.02■□□□□ 0.321e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-205ENST00000538884 540 ntTSL 415.51■□□□□ 0.071e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.04■□□□□ -01e-7■■■□□ 14.8
NKRFO15226 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC11.39□□□□□ -0.591e-7■■■□□ 14.8
NKRFO15226 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.52e-6■■■□□ 14.8
NKRFO15226 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.84□□□□□ -0.354e-7■■■□□ 14.8
NKRFO15226 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.254e-7■■■□□ 14.8
NKRFO15226 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.534e-7■■■□□ 14.8
NKRFO15226 KCMF1-204ENST00000456682 661 ntTSL 330.1■■■□□ 2.413e-6■■■□□ 14.8
NKRFO15226 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.253e-6■■■□□ 14.8
NKRFO15226 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-7■■■□□ 14.8
NKRFO15226 BCAR1-211ENST00000562556 4659 ntTSL 213.75□□□□□ -0.213e-7■■■□□ 14.8
NKRFO15226 STRN4-205ENST00000593979 675 ntTSL 420.9■□□□□ 0.945e-6■■■□□ 14.8
NKRFO15226 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.925e-6■■■□□ 14.8
NKRFO15226 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.775e-6■■■□□ 14.8
NKRFO15226 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.59■□□□□ 0.735e-6■■■□□ 14.8
NKRFO15226 STRN4-209ENST00000594704 913 ntTSL 516.22■□□□□ 0.195e-6■■■□□ 14.8
NKRFO15226 STRN4-220ENST00000600710 565 ntTSL 516.13■□□□□ 0.175e-6■■■□□ 14.8
NKRFO15226 STRN4-203ENST00000435164 1551 ntTSL 215.87■□□□□ 0.135e-6■■■□□ 14.8
NKRFO15226 STRN4-212ENST00000596012 560 ntTSL 414.62□□□□□ -0.075e-6■■■□□ 14.8
NKRFO15226 RBMS1-211ENST00000477486 562 ntTSL 425.65■■□□□ 1.72e-6■■■□□ 14.8
NKRFO15226 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)19.3■□□□□ 0.682e-6■■■□□ 14.8
NKRFO15226 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■■□□ 14.8
NKRFO15226 RBMS1-206ENST00000428519 583 ntTSL 410.31□□□□□ -0.762e-6■■■□□ 14.8
NKRFO15226 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC9.63□□□□□ -0.872e-6■■■□□ 14.8
NKRFO15226 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.82□□□□□ -1.322e-6■■■□□ 14.8
NKRFO15226 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)5.11□□□□□ -1.592e-6■■■□□ 14.8
NKRFO15226 LRP5L-208ENST00000610821 3602 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.391e-6■■■□□ 14.8
NKRFO15226 LRP5L-204ENST00000467672 3605 ntTSL 1 (best)12.48□□□□□ -0.411e-6■■■□□ 14.8
NKRFO15226 CCDC183-206ENST00000484858 422 ntTSL 322.21■■□□□ 1.156e-8■■■□□ 14.8
NKRFO15226 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.44■□□□□ 0.76e-8■■■□□ 14.8
NKRFO15226 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.686e-8■■■□□ 14.8
NKRFO15226 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.676e-8■■■□□ 14.8
NKRFO15226 CCDC183-205ENST00000481601 1556 ntTSL 218.62■□□□□ 0.576e-8■■■□□ 14.8
NKRFO15226 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.526e-8■■■□□ 14.8
NKRFO15226 CCDC183-207ENST00000496839 744 ntTSL 517.65■□□□□ 0.426e-8■■■□□ 14.8
NKRFO15226 CCDC183-204ENST00000479371 1786 ntTSL 1 (best)17.28■□□□□ 0.366e-8■■■□□ 14.8
NKRFO15226 CCDC183-203ENST00000430612 2321 ntTSL 215.95■□□□□ 0.146e-8■■■□□ 14.8
NKRFO15226 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.16e-8■■■□□ 14.8
NKRFO15226 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.056e-8■■■□□ 14.8
NKRFO15226 ULK1-202ENST00000537421 959 ntTSL 314.39□□□□□ -0.116e-8■■■□□ 14.8
NKRFO15226 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC12.03□□□□□ -0.486e-8■■■□□ 14.8
NKRFO15226 XRCC6-203ENST00000402580 2006 ntTSL 2 BASIC11.7□□□□□ -0.546e-8■■■□□ 14.8
NKRFO15226 XRCC6-204ENST00000405506 1958 ntTSL 5 BASIC11.52□□□□□ -0.576e-8■■■□□ 14.8
NKRFO15226 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.616e-8■■■□□ 14.8
NKRFO15226 XRCC6-207ENST00000464116 359 ntTSL 29.66□□□□□ -0.866e-8■■■□□ 14.8
NKRFO15226 KDM4B-205ENST00000588337 504 ntTSL 531.23■■■□□ 2.594e-7■■■□□ 14.8
NKRFO15226 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.711e-7■■■□□ 14.8
NKRFO15226 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.71e-7■■■□□ 14.8
NKRFO15226 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.08□□□□□ -1.921e-7■■■□□ 14.8
NKRFO15226 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.531e-6■■■□□ 14.8
NKRFO15226 TPRN-201ENST00000333046 2109 ntAPPRIS ALT2 TSL 219.08■□□□□ 0.641e-6■■■□□ 14.8
NKRFO15226 TPRN-204ENST00000541945 130 ntTSL 44.71□□□□□ -1.661e-6■■■□□ 14.8
NKRFO15226 NDST1-206ENST00000522491 777 ntTSL 223.97■■□□□ 1.433e-6■■■□□ 14.7
NKRFO15226 NDST1-204ENST00000519157 576 ntTSL 523.23■■□□□ 1.313e-6■■■□□ 14.7
NKRFO15226 NDST1-202ENST00000518299 769 ntTSL 219.15■□□□□ 0.663e-6■■■□□ 14.7
NKRFO15226 NDST1-208ENST00000524161 437 ntTSL 217.77■□□□□ 0.443e-6■■■□□ 14.7
NKRFO15226 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC14.11□□□□□ -0.153e-6■■■□□ 14.7
NKRFO15226 GPT2-203ENST00000562132 554 ntTSL 417.27■□□□□ 0.362e-6■■■□□ 14.7
NKRFO15226 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.012e-6■■■□□ 14.7
NKRFO15226 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC13.51□□□□□ -0.252e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.792e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-208ENST00000637724 435 ntTSL 323.55■■□□□ 1.362e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.822e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.682e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-204ENST00000587482 1311 ntTSL 518.68■□□□□ 0.582e-6■■■□□ 14.7
NKRFO15226 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.312e-6■■■□□ 14.7
NKRFO15226 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.58■■■□□ 2.496e-7■■■□□ 14.7
NKRFO15226 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.26■■■□□ 2.276e-7■■■□□ 14.7
NKRFO15226 UBALD1-204ENST00000588691 281 ntTSL 327.41■■□□□ 1.986e-7■■■□□ 14.7
NKRFO15226 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.09■■□□□ 1.936e-7■■■□□ 14.7
NKRFO15226 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.816e-7■■■□□ 14.7
NKRFO15226 UBALD1-207ENST00000591113 659 ntTSL 526.13■■□□□ 1.776e-7■■■□□ 14.7
NKRFO15226 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.02■■□□□ 1.66e-7■■■□□ 14.7
NKRFO15226 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.92■■□□□ 1.266e-7■■■□□ 14.7
NKRFO15226 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.09□□□□□ -0.311e-6■■■□□ 14.7
NKRFO15226 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)12.57□□□□□ -0.41e-6■■■□□ 14.7
NKRFO15226 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.411e-6■■■□□ 14.7
NKRFO15226 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC11.03□□□□□ -0.641e-6■■■□□ 14.7
NKRFO15226 MELTF-204ENST00000469783 806 ntTSL 319.79■□□□□ 0.761e-6■■■□□ 14.7
NKRFO15226 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.031e-7■■■□□ 14.7
NKRFO15226 DOT1L-203ENST00000452696 624 ntTSL 317.21■□□□□ 0.352e-6■■■□□ 14.7
NKRFO15226 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.66■□□□□ 0.582e-6■■■□□ 14.7
NKRFO15226 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.77■■□□□ 1.243e-8■■■□□ 14.7
NKRFO15226 HAGH-211ENST00000569339 820 ntTSL 328.18■■■□□ 2.17e-7■■■□□ 14.7
NKRFO15226 HAGH-205ENST00000564518 513 ntTSL 224.69■■□□□ 1.547e-7■■■□□ 14.7
NKRFO15226 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.24■■□□□ 1.477e-7■■■□□ 14.7
NKRFO15226 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.477e-7■■■□□ 14.7
NKRFO15226 HAGH-212ENST00000569700 1156 ntTSL 1 (best)22.59■■□□□ 1.217e-7■■■□□ 14.7
NKRFO15226 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.89■□□□□ 0.777e-7■■■□□ 14.7
NKRFO15226 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.67e-7■■■□□ 14.7
NKRFO15226 FAM169A-205ENST00000513277 803 ntTSL 320.21■□□□□ 0.836e-8■■■□□ 14.7
NKRFO15226 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.81□□□□□ -1.646e-8■■■□□ 14.7
NKRFO15226 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.766e-8■■■□□ 14.7
NKRFO15226 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.6■□□□□ 0.892e-6■■■□□ 14.6
NKRFO15226 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.442e-6■■■□□ 14.6
Retrieved 100 of 9,198 protein–RNA pairs in 165.5 ms