RNA–Protein interactions for RNA: ENST00000405878.5

XRCC6-205, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene XRCC6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-205ENST00000405878 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
XRCC6-205ENST00000405878 ABCC9O60706 1549 aa20.34■□□□□ 0.85
XRCC6-205ENST00000405878 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
XRCC6-205ENST00000405878 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
XRCC6-205ENST00000405878 NACADO15069 1562 aa19.22■□□□□ 0.67
XRCC6-205ENST00000405878 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
XRCC6-205ENST00000405878 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
XRCC6-205ENST00000405878 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
XRCC6-205ENST00000405878 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
XRCC6-205ENST00000405878 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
XRCC6-205ENST00000405878 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
XRCC6-205ENST00000405878 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
XRCC6-205ENST00000405878 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
XRCC6-205ENST00000405878 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
XRCC6-205ENST00000405878 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
XRCC6-205ENST00000405878 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
XRCC6-205ENST00000405878 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
XRCC6-205ENST00000405878 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
XRCC6-205ENST00000405878 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
XRCC6-205ENST00000405878 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
XRCC6-205ENST00000405878 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
XRCC6-205ENST00000405878 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
XRCC6-205ENST00000405878 CUX2O14529 1486 aa17.61■□□□□ 0.41
XRCC6-205ENST00000405878 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
XRCC6-205ENST00000405878 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
XRCC6-205ENST00000405878 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
XRCC6-205ENST00000405878 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
XRCC6-205ENST00000405878 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
XRCC6-205ENST00000405878 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
XRCC6-205ENST00000405878 NESP48681 1621 aa17.44■□□□□ 0.38
XRCC6-205ENST00000405878 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
XRCC6-205ENST00000405878 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
XRCC6-205ENST00000405878 HRCP23327 699 aa17.33■□□□□ 0.37
XRCC6-205ENST00000405878 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
XRCC6-205ENST00000405878 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
XRCC6-205ENST00000405878 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.34
XRCC6-205ENST00000405878 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
XRCC6-205ENST00000405878 WIZO95785 1651 aa17.14■□□□□ 0.33
XRCC6-205ENST00000405878 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
XRCC6-205ENST00000405878 WDR62O43379 1518 aa17.05■□□□□ 0.32
XRCC6-205ENST00000405878 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
XRCC6-205ENST00000405878 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
XRCC6-205ENST00000405878 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
XRCC6-205ENST00000405878 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
XRCC6-205ENST00000405878 CFTRP13569 1480 aa16.98■□□□□ 0.31
XRCC6-205ENST00000405878 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
XRCC6-205ENST00000405878 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
XRCC6-205ENST00000405878 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
XRCC6-205ENST00000405878 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
XRCC6-205ENST00000405878 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
XRCC6-205ENST00000405878 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
XRCC6-205ENST00000405878 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
XRCC6-205ENST00000405878 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
XRCC6-205ENST00000405878 PRDM2Q13029 1718 aa16.77■□□□□ 0.27
XRCC6-205ENST00000405878 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
XRCC6-205ENST00000405878 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
XRCC6-205ENST00000405878 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
XRCC6-205ENST00000405878 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
XRCC6-205ENST00000405878 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
XRCC6-205ENST00000405878 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
XRCC6-205ENST00000405878 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
XRCC6-205ENST00000405878 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
XRCC6-205ENST00000405878 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
XRCC6-205ENST00000405878 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
XRCC6-205ENST00000405878 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
XRCC6-205ENST00000405878 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
XRCC6-205ENST00000405878 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.236e-7■■■■□ 22.3
XRCC6-205ENST00000405878 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
XRCC6-205ENST00000405878 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
XRCC6-205ENST00000405878 FBLN2P98095 1184 aa16.43■□□□□ 0.22
XRCC6-205ENST00000405878 SOGA1O94964 1423 aa16.43■□□□□ 0.22
XRCC6-205ENST00000405878 CHD1O14646 1710 aa16.42■□□□□ 0.22
XRCC6-205ENST00000405878 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
XRCC6-205ENST00000405878 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
XRCC6-205ENST00000405878 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
XRCC6-205ENST00000405878 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
XRCC6-205ENST00000405878 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
XRCC6-205ENST00000405878 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
XRCC6-205ENST00000405878 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
XRCC6-205ENST00000405878 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.21
XRCC6-205ENST00000405878 CUX1P39880 1505 aa16.31■□□□□ 0.2
XRCC6-205ENST00000405878 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
XRCC6-205ENST00000405878 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
XRCC6-205ENST00000405878 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
XRCC6-205ENST00000405878 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
XRCC6-205ENST00000405878 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
XRCC6-205ENST00000405878 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
XRCC6-205ENST00000405878 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
XRCC6-205ENST00000405878 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
XRCC6-205ENST00000405878 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
XRCC6-205ENST00000405878 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
XRCC6-205ENST00000405878 MYT1Q01538 1121 aa16.21■□□□□ 0.19
XRCC6-205ENST00000405878 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
XRCC6-205ENST00000405878 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
XRCC6-205ENST00000405878 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
XRCC6-205ENST00000405878 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
XRCC6-205ENST00000405878 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
XRCC6-205ENST00000405878 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
XRCC6-205ENST00000405878 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
XRCC6-205ENST00000405878 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms