RNA–Protein interactions for RNA: ENST00000508628.6

RNF213-204, Transcript of ring finger protein 213, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RNF213, Length 17,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-204ENST00000508628 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
RNF213-204ENST00000508628 MYT1Q01538 1121 aa9.19□□□□□ -0.94
RNF213-204ENST00000508628 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
RNF213-204ENST00000508628 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
RNF213-204ENST00000508628 YTHDC1Q96MU7 727 aaKnown RBP8.85□□□□□ -0.99
RNF213-204ENST00000508628 DCAF8L2P0C7V8 631 aa8.84□□□□□ -0.99
RNF213-204ENST00000508628 CENPBP07199 599 aaPredicted RBP8.76□□□□□ -1.01
RNF213-204ENST00000508628 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
RNF213-204ENST00000508628 APLP2Q06481 763 aa8.62□□□□□ -1.03
RNF213-204ENST00000508628 NEFLP07196 543 aa8.59□□□□□ -1.03
RNF213-204ENST00000508628 FAM9AQ8IZU1 332 aaPredicted RBP8.58□□□□□ -1.04
RNF213-204ENST00000508628 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
RNF213-204ENST00000508628 ZEB1P37275 1124 aaPredicted RBP8.56□□□□□ -1.04
RNF213-204ENST00000508628 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.05
RNF213-204ENST00000508628 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
RNF213-204ENST00000508628 PCGF6Q9BYE7 350 aa8.34□□□□□ -1.07
RNF213-204ENST00000508628 EHMT2Q96KQ7 1210 aa8.3□□□□□ -1.08
RNF213-204ENST00000508628 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
RNF213-204ENST00000508628 GLIPR1L2Q4G1C9 344 aa8.17□□□□□ -1.1
RNF213-204ENST00000508628 CLSPNQ9HAW4 1339 aa8.12□□□□□ -1.11
RNF213-204ENST00000508628 NISCHQ9Y2I1 1504 aa8.08□□□□□ -1.12
RNF213-204ENST00000508628 ANP32BQ92688 251 aaKnown RBP8.04□□□□□ -1.12
RNF213-204ENST00000508628 ATP1B4Q9UN42 357 aaPredicted RBP8.04□□□□□ -1.12
RNF213-204ENST00000508628 EIF5BO60841 1220 aaKnown RBP7.99□□□□□ -1.13
RNF213-204ENST00000508628 CDK11AQ9UQ88 783 aaPredicted RBP7.99□□□□□ -1.13
RNF213-204ENST00000508628 ZBTB47Q9UFB7 747 aaPredicted RBP7.98□□□□□ -1.13
RNF213-204ENST00000508628 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
RNF213-204ENST00000508628 SHROOM4Q9ULL8 1493 aa7.95□□□□□ -1.14
RNF213-204ENST00000508628 HRCP23327 699 aa7.95□□□□□ -1.14
RNF213-204ENST00000508628 UBTFP17480 764 aaKnown RBP7.94□□□□□ -1.14
RNF213-204ENST00000508628 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
RNF213-204ENST00000508628 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
RNF213-204ENST00000508628 TRIM41Q8WV44 630 aa7.91□□□□□ -1.14
RNF213-204ENST00000508628 POLR3GLQ9BT43 218 aa7.91□□□□□ -1.14
RNF213-204ENST00000508628 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
RNF213-204ENST00000508628 ANP32AP39687 249 aaKnown RBP7.89□□□□□ -1.15
RNF213-204ENST00000508628 SLC4A1APQ9BWU0 796 aaKnown RBP7.85□□□□□ -1.15
RNF213-204ENST00000508628 DIEXFQ68CQ4 756 aaKnown RBP7.83□□□□□ -1.16
RNF213-204ENST00000508628 NEFMP07197 916 aa7.81□□□□□ -1.16
RNF213-204ENST00000508628 HSP90AA1P07900 732 aaKnown RBP7.8□□□□□ -1.16
RNF213-204ENST00000508628 CDK11BP21127 795 aaKnown RBP7.78□□□□□ -1.16
RNF213-204ENST00000508628 ANP32CO43423 234 aa7.76□□□□□ -1.17
RNF213-204ENST00000508628 UPF2Q9HAU5 1272 aaKnown RBP7.76□□□□□ -1.17
RNF213-204ENST00000508628 CANXP27824 592 aaKnown RBP7.75□□□□□ -1.17
RNF213-204ENST00000508628 GTF3C3Q9Y5Q9 886 aa7.75□□□□□ -1.17
RNF213-204ENST00000508628 CNGB1Q14028 1251 aaPredicted RBP7.75□□□□□ -1.17
RNF213-204ENST00000508628 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
RNF213-204ENST00000508628 TRIM44Q96DX7 344 aaPredicted RBP7.73□□□□□ -1.17
RNF213-204ENST00000508628 NCLP19338 710 aaKnown RBP7.72□□□□□ -1.17
RNF213-204ENST00000508628 BCANQ96GW7 911 aa7.71□□□□□ -1.18
RNF213-204ENST00000508628 ITGAEP38570 1179 aa7.71□□□□□ -1.18
RNF213-204ENST00000508628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.68□□□□□ -1.18
RNF213-204ENST00000508628 HNRNPUL2Q1KMD3 747 aaKnown RBP7.68□□□□□ -1.18
RNF213-204ENST00000508628 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
RNF213-204ENST00000508628 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.19
RNF213-204ENST00000508628 SLC24A1O60721 1099 aa7.64□□□□□ -1.19
RNF213-204ENST00000508628 CHIC1Q5VXU3 224 aa7.62□□□□□ -1.19
RNF213-204ENST00000508628 BCL11AQ9H165 835 aa7.61□□□□□ -1.19
RNF213-204ENST00000508628 ERICH6BQ5W0A0 696 aa7.59□□□□□ -1.19
RNF213-204ENST00000508628 GOLGA6L22H0YM25 854 aa7.59□□□□□ -1.2
RNF213-204ENST00000508628 NBR1Q14596 966 aa7.58□□□□□ -1.2
RNF213-204ENST00000508628 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
RNF213-204ENST00000508628 BECN1Q14457 450 aa7.57□□□□□ -1.2
RNF213-204ENST00000508628 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.56□□□□□ -1.2
RNF213-204ENST00000508628 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
RNF213-204ENST00000508628 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
RNF213-204ENST00000508628 NEUROD1Q13562 356 aa7.53□□□□□ -1.2
RNF213-204ENST00000508628 DNTTIP2Q5QJE6 756 aaKnown RBP7.53□□□□□ -1.2
RNF213-204ENST00000508628 ZRSR1Q15695 479 aaKnown RBP7.53□□□□□ -1.2
RNF213-204ENST00000508628 PTMAP06454 111 aaKnown RBP7.52□□□□□ -1.2
RNF213-204ENST00000508628 GOLGA6L6A8MZA4 724 aa7.51□□□□□ -1.21
RNF213-204ENST00000508628 NRDCO43847 1150 aa7.51□□□□□ -1.21
RNF213-204ENST00000508628 CHAF1AQ13111 956 aaPredicted RBP7.5□□□□□ -1.21
RNF213-204ENST00000508628 ARXQ96QS3 562 aa7.5□□□□□ -1.21
RNF213-204ENST00000508628 NAP1L5Q96NT1 182 aaPredicted RBP7.5□□□□□ -1.21
RNF213-204ENST00000508628 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
RNF213-204ENST00000508628 CCDC136Q96JN2 1154 aa7.49□□□□□ -1.21
RNF213-204ENST00000508628 FAM50AQ14320 339 aaKnown RBP7.49□□□□□ -1.21
RNF213-204ENST00000508628 FKBP8Q14318 412 aa7.48□□□□□ -1.21
RNF213-204ENST00000508628 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
RNF213-204ENST00000508628 MYH16Q9H6N6 1097 aa7.48□□□□□ -1.21
RNF213-204ENST00000508628 TNNT3P45378 269 aaPredicted RBP7.46□□□□□ -1.22
RNF213-204ENST00000508628 PTMSP20962 102 aa7.44□□□□□ -1.22
RNF213-204ENST00000508628 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
RNF213-204ENST00000508628 CALRP27797 417 aaKnown RBP7.43□□□□□ -1.22
RNF213-204ENST00000508628 CASC1Q6TDU7 716 aa7.43□□□□□ -1.22
RNF213-204ENST00000508628 USP35Q9P2H5 1018 aa7.42□□□□□ -1.22
RNF213-204ENST00000508628 LOC105371045A0A1W2PR82 267 aa7.4□□□□□ -1.22
RNF213-204ENST00000508628 MSNP26038 577 aaKnown RBP7.38□□□□□ -1.23
RNF213-204ENST00000508628 HNRNPUQ00839 825 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNF213-204ENST00000508628 TMC1Q8TDI8 760 aa7.36□□□□□ -1.23
RNF213-204ENST00000508628 AMER1Q5JTC6 1135 aaPredicted RBP7.35□□□□□ -1.23
RNF213-204ENST00000508628 SETQ01105 290 aaPredicted RBP7.34□□□□□ -1.23
RNF213-204ENST00000508628 KIAA2012Q0VF49 1180 aa7.34□□□□□ -1.23
RNF213-204ENST00000508628 GOLGA6L1Q8N7Z2 621 aa7.34□□□□□ -1.23
RNF213-204ENST00000508628 WDR43Q15061 677 aaKnown RBP eCLIP7.34□□□□□ -1.233e-6■■■■□ 20.8
RNF213-204ENST00000508628 NOC3LQ8WTT2 800 aaKnown RBP7.32□□□□□ -1.24
RNF213-204ENST00000508628 PLCB2Q00722 1185 aa7.32□□□□□ -1.24
RNF213-204ENST00000508628 FAM9BQ8IZU0 186 aa7.31□□□□□ -1.24
RNF213-204ENST00000508628 PNNQ9H307 717 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms