RNA–Protein interactions for RNA: ENST00000402580.7

XRCC6-203, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-203ENST00000402580 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
XRCC6-203ENST00000402580 CCDC180Q9P1Z9 1646 aa22.27■■□□□ 1.16
XRCC6-203ENST00000402580 ABCC9O60706 1549 aa21.69■■□□□ 1.06
XRCC6-203ENST00000402580 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
XRCC6-203ENST00000402580 NACADO15069 1562 aa20.94■□□□□ 0.94
XRCC6-203ENST00000402580 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
XRCC6-203ENST00000402580 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
XRCC6-203ENST00000402580 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
XRCC6-203ENST00000402580 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
XRCC6-203ENST00000402580 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
XRCC6-203ENST00000402580 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
XRCC6-203ENST00000402580 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
XRCC6-203ENST00000402580 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
XRCC6-203ENST00000402580 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
XRCC6-203ENST00000402580 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
XRCC6-203ENST00000402580 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
XRCC6-203ENST00000402580 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
XRCC6-203ENST00000402580 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
XRCC6-203ENST00000402580 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
XRCC6-203ENST00000402580 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
XRCC6-203ENST00000402580 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
XRCC6-203ENST00000402580 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
XRCC6-203ENST00000402580 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
XRCC6-203ENST00000402580 PEG3Q9GZU2 1588 aa19.22■□□□□ 0.67
XRCC6-203ENST00000402580 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
XRCC6-203ENST00000402580 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
XRCC6-203ENST00000402580 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
XRCC6-203ENST00000402580 WIZO95785 1651 aa18.88■□□□□ 0.61
XRCC6-203ENST00000402580 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
XRCC6-203ENST00000402580 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
XRCC6-203ENST00000402580 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
XRCC6-203ENST00000402580 NESP48681 1621 aa18.73■□□□□ 0.59
XRCC6-203ENST00000402580 ERCC6Q03468 1493 aa18.73■□□□□ 0.59
XRCC6-203ENST00000402580 CUX2O14529 1486 aa18.72■□□□□ 0.59
XRCC6-203ENST00000402580 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
XRCC6-203ENST00000402580 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
XRCC6-203ENST00000402580 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
XRCC6-203ENST00000402580 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
XRCC6-203ENST00000402580 CFTRP13569 1480 aa18.56■□□□□ 0.56
XRCC6-203ENST00000402580 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
XRCC6-203ENST00000402580 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
XRCC6-203ENST00000402580 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
XRCC6-203ENST00000402580 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
XRCC6-203ENST00000402580 WDR62O43379 1518 aa18.43■□□□□ 0.54
XRCC6-203ENST00000402580 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
XRCC6-203ENST00000402580 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
XRCC6-203ENST00000402580 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
XRCC6-203ENST00000402580 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
XRCC6-203ENST00000402580 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
XRCC6-203ENST00000402580 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
XRCC6-203ENST00000402580 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
XRCC6-203ENST00000402580 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
XRCC6-203ENST00000402580 TARBP1Q13395 1621 aaKnown RBP17.99■□□□□ 0.47
XRCC6-203ENST00000402580 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
XRCC6-203ENST00000402580 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
XRCC6-203ENST00000402580 CUX1P39880 1505 aa17.94■□□□□ 0.46
XRCC6-203ENST00000402580 ZNF608Q9ULD9 1512 aaPredicted RBP17.92■□□□□ 0.46
XRCC6-203ENST00000402580 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
XRCC6-203ENST00000402580 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
XRCC6-203ENST00000402580 SOGA1O94964 1423 aa17.88■□□□□ 0.45
XRCC6-203ENST00000402580 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
XRCC6-203ENST00000402580 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
XRCC6-203ENST00000402580 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
XRCC6-203ENST00000402580 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
XRCC6-203ENST00000402580 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.446e-7■■■■□ 22.3
XRCC6-203ENST00000402580 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
XRCC6-203ENST00000402580 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
XRCC6-203ENST00000402580 GRIN2BQ13224 1484 aa17.73■□□□□ 0.43
XRCC6-203ENST00000402580 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
XRCC6-203ENST00000402580 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
XRCC6-203ENST00000402580 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
XRCC6-203ENST00000402580 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
XRCC6-203ENST00000402580 CHD1O14646 1710 aa17.71■□□□□ 0.43
XRCC6-203ENST00000402580 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
XRCC6-203ENST00000402580 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
XRCC6-203ENST00000402580 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
XRCC6-203ENST00000402580 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
XRCC6-203ENST00000402580 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
XRCC6-203ENST00000402580 RIMBP3CA6NJZ7 1639 aa17.57■□□□□ 0.4
XRCC6-203ENST00000402580 RIMBP3BA6NNM3 1639 aa17.57■□□□□ 0.4
XRCC6-203ENST00000402580 RIMBP3Q9UFD9 1639 aa17.57■□□□□ 0.4
XRCC6-203ENST00000402580 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
XRCC6-203ENST00000402580 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
XRCC6-203ENST00000402580 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
XRCC6-203ENST00000402580 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
XRCC6-203ENST00000402580 FBLN2P98095 1184 aa17.52■□□□□ 0.39
XRCC6-203ENST00000402580 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
XRCC6-203ENST00000402580 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
XRCC6-203ENST00000402580 NUP160Q12769 1436 aa17.45■□□□□ 0.38
XRCC6-203ENST00000402580 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
XRCC6-203ENST00000402580 CUL7Q14999 1698 aa17.4■□□□□ 0.38
XRCC6-203ENST00000402580 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
XRCC6-203ENST00000402580 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
XRCC6-203ENST00000402580 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
XRCC6-203ENST00000402580 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
XRCC6-203ENST00000402580 IGF1RP08069 1367 aa17.36■□□□□ 0.37
XRCC6-203ENST00000402580 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
XRCC6-203ENST00000402580 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
XRCC6-203ENST00000402580 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
XRCC6-203ENST00000402580 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms