RNA–Protein interactions for RNA: ENST00000539396.5

STRN4-204, Transcript of striatin 4, humanhuman

TSL 2 BASIC

Gene STRN4, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-204ENST00000539396 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
STRN4-204ENST00000539396 CCDC180Q9P1Z9 1646 aa32.19■■■□□ 2.74
STRN4-204ENST00000539396 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
STRN4-204ENST00000539396 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
STRN4-204ENST00000539396 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
STRN4-204ENST00000539396 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
STRN4-204ENST00000539396 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
STRN4-204ENST00000539396 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.43
STRN4-204ENST00000539396 ABCC9O60706 1549 aa30.15■■■□□ 2.42
STRN4-204ENST00000539396 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
STRN4-204ENST00000539396 NACADO15069 1562 aa29.89■■■□□ 2.38
STRN4-204ENST00000539396 CHIC1Q5VXU3 224 aa29.83■■■□□ 2.37
STRN4-204ENST00000539396 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
STRN4-204ENST00000539396 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
STRN4-204ENST00000539396 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
STRN4-204ENST00000539396 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
STRN4-204ENST00000539396 WIZO95785 1651 aa28.98■■■□□ 2.23
STRN4-204ENST00000539396 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
STRN4-204ENST00000539396 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
STRN4-204ENST00000539396 LOC105371045A0A1W2PR82 267 aa28.89■■■□□ 2.22
STRN4-204ENST00000539396 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
STRN4-204ENST00000539396 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.191e-8■□□□□ 9.8
STRN4-204ENST00000539396 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
STRN4-204ENST00000539396 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
STRN4-204ENST00000539396 TOP2AP11388 1531 aaKnown RBP28.58■■■□□ 2.17
STRN4-204ENST00000539396 FAM9AQ8IZU1 332 aaPredicted RBP28.51■■■□□ 2.15
STRN4-204ENST00000539396 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.14
STRN4-204ENST00000539396 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
STRN4-204ENST00000539396 PCGF6Q9BYE7 350 aa28.4■■■□□ 2.14
STRN4-204ENST00000539396 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
STRN4-204ENST00000539396 EHMT2Q96KQ7 1210 aa28.23■■■□□ 2.11
STRN4-204ENST00000539396 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
STRN4-204ENST00000539396 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
STRN4-204ENST00000539396 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
STRN4-204ENST00000539396 HRCP23327 699 aa28.11■■■□□ 2.09
STRN4-204ENST00000539396 TRIM26Q12899 539 aaPredicted RBP28.02■■■□□ 2.08
STRN4-204ENST00000539396 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
STRN4-204ENST00000539396 SOGA1O94964 1423 aa27.85■■■□□ 2.05
STRN4-204ENST00000539396 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
STRN4-204ENST00000539396 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
STRN4-204ENST00000539396 EEA1Q15075 1411 aa27.7■■■□□ 2.02
STRN4-204ENST00000539396 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
STRN4-204ENST00000539396 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
STRN4-204ENST00000539396 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
STRN4-204ENST00000539396 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
STRN4-204ENST00000539396 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
STRN4-204ENST00000539396 TNIKQ9UKE5 1360 aa27.55■■■□□ 2
STRN4-204ENST00000539396 CEP162Q5TB80 1403 aa27.52■■■□□ 2
STRN4-204ENST00000539396 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
STRN4-204ENST00000539396 GOLGA3Q08378 1498 aa27.45■■□□□ 1.98
STRN4-204ENST00000539396 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
STRN4-204ENST00000539396 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
STRN4-204ENST00000539396 CFTRP13569 1480 aa27.31■■□□□ 1.96
STRN4-204ENST00000539396 KIF21BO75037 1637 aa27.29■■□□□ 1.96
STRN4-204ENST00000539396 BIVM-ERCC5R4GMW8 1640 aa27.28■■□□□ 1.96
STRN4-204ENST00000539396 CUX1P39880 1505 aa27.22■■□□□ 1.95
STRN4-204ENST00000539396 ZEB1P37275 1124 aaPredicted RBP27.21■■□□□ 1.95
STRN4-204ENST00000539396 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
STRN4-204ENST00000539396 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
STRN4-204ENST00000539396 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
STRN4-204ENST00000539396 CLIP1P30622 1438 aa27.12■■□□□ 1.93
STRN4-204ENST00000539396 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
STRN4-204ENST00000539396 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
STRN4-204ENST00000539396 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
STRN4-204ENST00000539396 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
STRN4-204ENST00000539396 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
STRN4-204ENST00000539396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.91
STRN4-204ENST00000539396 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
STRN4-204ENST00000539396 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
STRN4-204ENST00000539396 CCER1Q8TC90 406 aaPredicted RBP26.87■■□□□ 1.89
STRN4-204ENST00000539396 CUX2O14529 1486 aa26.82■■□□□ 1.88
STRN4-204ENST00000539396 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
STRN4-204ENST00000539396 APLP2Q06481 763 aa26.81■■□□□ 1.88
STRN4-204ENST00000539396 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
STRN4-204ENST00000539396 IGF1RP08069 1367 aa26.77■■□□□ 1.88
STRN4-204ENST00000539396 NESP48681 1621 aa26.73■■□□□ 1.87
STRN4-204ENST00000539396 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
STRN4-204ENST00000539396 CARMIL1Q5VZK9 1371 aa26.64■■□□□ 1.85
STRN4-204ENST00000539396 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
STRN4-204ENST00000539396 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
STRN4-204ENST00000539396 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
STRN4-204ENST00000539396 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
STRN4-204ENST00000539396 ARHGAP35Q9NRY4 1499 aa26.58■■□□□ 1.85
STRN4-204ENST00000539396 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
STRN4-204ENST00000539396 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
STRN4-204ENST00000539396 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
STRN4-204ENST00000539396 KANK4Q5T7N3 995 aaPredicted RBP26.52■■□□□ 1.84
STRN4-204ENST00000539396 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
STRN4-204ENST00000539396 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.82
STRN4-204ENST00000539396 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
STRN4-204ENST00000539396 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
STRN4-204ENST00000539396 P3H3Q8IVL6 736 aa26.29■■□□□ 1.8
STRN4-204ENST00000539396 CUL7Q14999 1698 aa26.25■■□□□ 1.79
STRN4-204ENST00000539396 RRBP1Q9P2E9 1410 aaKnown RBP26.25■■□□□ 1.79
STRN4-204ENST00000539396 WDR97A6NE52 1622 aa26.24■■□□□ 1.79
STRN4-204ENST00000539396 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
STRN4-204ENST00000539396 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.78
STRN4-204ENST00000539396 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
STRN4-204ENST00000539396 TIAM1Q13009 1591 aa26.19■■□□□ 1.78
STRN4-204ENST00000539396 MAP3K1Q13233 1512 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms