RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
XRCC6-204ENST00000405506 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
XRCC6-204ENST00000405506 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
XRCC6-204ENST00000405506 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
XRCC6-204ENST00000405506 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
XRCC6-204ENST00000405506 ABCC9O60706 1549 aa19■□□□□ 0.63
XRCC6-204ENST00000405506 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
XRCC6-204ENST00000405506 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
XRCC6-204ENST00000405506 NACADO15069 1562 aa18.69■□□□□ 0.58
XRCC6-204ENST00000405506 SCRIBQ14160 1630 aa18.58■□□□□ 0.57
XRCC6-204ENST00000405506 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
XRCC6-204ENST00000405506 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
XRCC6-204ENST00000405506 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
XRCC6-204ENST00000405506 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
XRCC6-204ENST00000405506 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
XRCC6-204ENST00000405506 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
XRCC6-204ENST00000405506 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
XRCC6-204ENST00000405506 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
XRCC6-204ENST00000405506 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
XRCC6-204ENST00000405506 WIZO95785 1651 aa17.81■□□□□ 0.44
XRCC6-204ENST00000405506 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
XRCC6-204ENST00000405506 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
XRCC6-204ENST00000405506 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
XRCC6-204ENST00000405506 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
XRCC6-204ENST00000405506 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.38
XRCC6-204ENST00000405506 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
XRCC6-204ENST00000405506 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
XRCC6-204ENST00000405506 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
XRCC6-204ENST00000405506 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
XRCC6-204ENST00000405506 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
XRCC6-204ENST00000405506 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
XRCC6-204ENST00000405506 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
XRCC6-204ENST00000405506 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
XRCC6-204ENST00000405506 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
XRCC6-204ENST00000405506 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
XRCC6-204ENST00000405506 HRCP23327 699 aa16.91■□□□□ 0.3
XRCC6-204ENST00000405506 CFTRP13569 1480 aa16.91■□□□□ 0.3
XRCC6-204ENST00000405506 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
XRCC6-204ENST00000405506 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
XRCC6-204ENST00000405506 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
XRCC6-204ENST00000405506 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
XRCC6-204ENST00000405506 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
XRCC6-204ENST00000405506 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
XRCC6-204ENST00000405506 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
XRCC6-204ENST00000405506 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
XRCC6-204ENST00000405506 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
XRCC6-204ENST00000405506 SOGA1O94964 1423 aa16.77■□□□□ 0.28
XRCC6-204ENST00000405506 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
XRCC6-204ENST00000405506 CUX1P39880 1505 aa16.75■□□□□ 0.27
XRCC6-204ENST00000405506 NESP48681 1621 aa16.74■□□□□ 0.27
XRCC6-204ENST00000405506 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
XRCC6-204ENST00000405506 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
XRCC6-204ENST00000405506 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
XRCC6-204ENST00000405506 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
XRCC6-204ENST00000405506 EEA1Q15075 1411 aa16.64■□□□□ 0.25
XRCC6-204ENST00000405506 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.25
XRCC6-204ENST00000405506 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
XRCC6-204ENST00000405506 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
XRCC6-204ENST00000405506 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
XRCC6-204ENST00000405506 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.24
XRCC6-204ENST00000405506 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
XRCC6-204ENST00000405506 KIF21BO75037 1637 aa16.5■□□□□ 0.23
XRCC6-204ENST00000405506 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
XRCC6-204ENST00000405506 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
XRCC6-204ENST00000405506 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
XRCC6-204ENST00000405506 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
XRCC6-204ENST00000405506 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
XRCC6-204ENST00000405506 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
XRCC6-204ENST00000405506 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
XRCC6-204ENST00000405506 CUX2O14529 1486 aa16.42■□□□□ 0.22
XRCC6-204ENST00000405506 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
XRCC6-204ENST00000405506 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
XRCC6-204ENST00000405506 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
XRCC6-204ENST00000405506 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
XRCC6-204ENST00000405506 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
XRCC6-204ENST00000405506 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
XRCC6-204ENST00000405506 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
XRCC6-204ENST00000405506 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
XRCC6-204ENST00000405506 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
XRCC6-204ENST00000405506 IGF1RP08069 1367 aa16.32■□□□□ 0.2
XRCC6-204ENST00000405506 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
XRCC6-204ENST00000405506 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
XRCC6-204ENST00000405506 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
XRCC6-204ENST00000405506 WDR62O43379 1518 aa16.25■□□□□ 0.19
XRCC6-204ENST00000405506 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
XRCC6-204ENST00000405506 CARMIL1Q5VZK9 1371 aa16.22■□□□□ 0.19
XRCC6-204ENST00000405506 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
XRCC6-204ENST00000405506 CLIP1P30622 1438 aa16.21■□□□□ 0.19
XRCC6-204ENST00000405506 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
XRCC6-204ENST00000405506 CUL7Q14999 1698 aa16.18■□□□□ 0.18
XRCC6-204ENST00000405506 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
XRCC6-204ENST00000405506 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
XRCC6-204ENST00000405506 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
XRCC6-204ENST00000405506 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.176e-7■■■■□ 22.3
XRCC6-204ENST00000405506 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
XRCC6-204ENST00000405506 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
XRCC6-204ENST00000405506 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
XRCC6-204ENST00000405506 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.16
XRCC6-204ENST00000405506 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
XRCC6-204ENST00000405506 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms