RNA–Protein interactions for RNA: ENST00000333046.8

TPRN-201, Transcript of taperin, humanhuman

APPRIS ALT2 TSL 2

Gene TPRN, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-201ENST00000333046 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
TPRN-201ENST00000333046 CCDC180Q9P1Z9 1646 aa32.5■■■□□ 2.79
TPRN-201ENST00000333046 ZCCHC6Q5VYS8 1495 aaKnown RBP31.59■■■□□ 2.65
TPRN-201ENST00000333046 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
TPRN-201ENST00000333046 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
TPRN-201ENST00000333046 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.54
TPRN-201ENST00000333046 ABCC9O60706 1549 aa30.84■■■□□ 2.53
TPRN-201ENST00000333046 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
TPRN-201ENST00000333046 NACADO15069 1562 aa30.3■■■□□ 2.44
TPRN-201ENST00000333046 SCRIBQ14160 1630 aa30.15■■■□□ 2.42
TPRN-201ENST00000333046 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
TPRN-201ENST00000333046 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
TPRN-201ENST00000333046 UNC13AQ9UPW8 1703 aa29.43■■■□□ 2.3
TPRN-201ENST00000333046 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
TPRN-201ENST00000333046 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
TPRN-201ENST00000333046 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
TPRN-201ENST00000333046 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
TPRN-201ENST00000333046 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.25
TPRN-201ENST00000333046 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
TPRN-201ENST00000333046 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
TPRN-201ENST00000333046 WIZO95785 1651 aa28.9■■■□□ 2.22
TPRN-201ENST00000333046 SMARCA4P51532 1647 aa28.83■■■□□ 2.2
TPRN-201ENST00000333046 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
TPRN-201ENST00000333046 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
TPRN-201ENST00000333046 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
TPRN-201ENST00000333046 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
TPRN-201ENST00000333046 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
TPRN-201ENST00000333046 HRCP23327 699 aa28.27■■■□□ 2.12
TPRN-201ENST00000333046 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
TPRN-201ENST00000333046 BAZ1BQ9UIG0 1483 aaKnown RBP28.2■■■□□ 2.1
TPRN-201ENST00000333046 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
TPRN-201ENST00000333046 LOC105371045A0A1W2PR82 267 aa28.04■■■□□ 2.08
TPRN-201ENST00000333046 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
TPRN-201ENST00000333046 PCGF6Q9BYE7 350 aa27.94■■■□□ 2.06
TPRN-201ENST00000333046 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
TPRN-201ENST00000333046 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
TPRN-201ENST00000333046 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
TPRN-201ENST00000333046 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
TPRN-201ENST00000333046 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.011e-7■■■■■ 66.8
TPRN-201ENST00000333046 TRIM26Q12899 539 aaPredicted RBP27.53■■■□□ 2
TPRN-201ENST00000333046 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
TPRN-201ENST00000333046 CFTRP13569 1480 aa27.49■■□□□ 1.99
TPRN-201ENST00000333046 SYNJ1O43426 1573 aa27.45■■□□□ 1.98
TPRN-201ENST00000333046 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
TPRN-201ENST00000333046 SOGA1O94964 1423 aa27.42■■□□□ 1.98
TPRN-201ENST00000333046 CADPSQ9ULU8 1353 aa27.39■■□□□ 1.98
TPRN-201ENST00000333046 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
TPRN-201ENST00000333046 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
TPRN-201ENST00000333046 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
TPRN-201ENST00000333046 EEA1Q15075 1411 aa27.24■■□□□ 1.95
TPRN-201ENST00000333046 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
TPRN-201ENST00000333046 CUX1P39880 1505 aa27.2■■□□□ 1.94
TPRN-201ENST00000333046 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
TPRN-201ENST00000333046 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
TPRN-201ENST00000333046 NESP48681 1621 aa27.16■■□□□ 1.94
TPRN-201ENST00000333046 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
TPRN-201ENST00000333046 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
TPRN-201ENST00000333046 TNIKQ9UKE5 1360 aa27■■□□□ 1.91
TPRN-201ENST00000333046 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
TPRN-201ENST00000333046 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
TPRN-201ENST00000333046 CEP162Q5TB80 1403 aa26.94■■□□□ 1.9
TPRN-201ENST00000333046 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
TPRN-201ENST00000333046 KIF21BO75037 1637 aa26.89■■□□□ 1.9
TPRN-201ENST00000333046 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
TPRN-201ENST00000333046 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
TPRN-201ENST00000333046 KIF27Q86VH2 1401 aa26.85■■□□□ 1.89
TPRN-201ENST00000333046 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
TPRN-201ENST00000333046 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
TPRN-201ENST00000333046 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
TPRN-201ENST00000333046 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
TPRN-201ENST00000333046 CUX2O14529 1486 aa26.78■■□□□ 1.88
TPRN-201ENST00000333046 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
TPRN-201ENST00000333046 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
TPRN-201ENST00000333046 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
TPRN-201ENST00000333046 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.86
TPRN-201ENST00000333046 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
TPRN-201ENST00000333046 IGF1RP08069 1367 aa26.66■■□□□ 1.86
TPRN-201ENST00000333046 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
TPRN-201ENST00000333046 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
TPRN-201ENST00000333046 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
TPRN-201ENST00000333046 CLIP1P30622 1438 aa26.55■■□□□ 1.84
TPRN-201ENST00000333046 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
TPRN-201ENST00000333046 MRC2Q9UBG0 1479 aa26.47■■□□□ 1.83
TPRN-201ENST00000333046 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
TPRN-201ENST00000333046 VPS8Q8N3P4 1428 aa26.43■■□□□ 1.82
TPRN-201ENST00000333046 WDR97A6NE52 1622 aa26.39■■□□□ 1.81
TPRN-201ENST00000333046 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
TPRN-201ENST00000333046 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
TPRN-201ENST00000333046 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
TPRN-201ENST00000333046 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
TPRN-201ENST00000333046 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
TPRN-201ENST00000333046 WDR62O43379 1518 aa26.28■■□□□ 1.8
TPRN-201ENST00000333046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
TPRN-201ENST00000333046 CCER1Q8TC90 406 aaPredicted RBP26.27■■□□□ 1.8
TPRN-201ENST00000333046 CUL7Q14999 1698 aa26.24■■□□□ 1.79
TPRN-201ENST00000333046 AQRO60306 1485 aaKnown RBP eCLIP26.24■■□□□ 1.792e-6■■■■■ 26.9
TPRN-201ENST00000333046 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
TPRN-201ENST00000333046 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
TPRN-201ENST00000333046 ARHGAP35Q9NRY4 1499 aa26.2■■□□□ 1.78
TPRN-201ENST00000333046 APLP2Q06481 763 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms