RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
XRCC6-206ENST00000428575 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
XRCC6-206ENST00000428575 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
XRCC6-206ENST00000428575 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
XRCC6-206ENST00000428575 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
XRCC6-206ENST00000428575 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
XRCC6-206ENST00000428575 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
XRCC6-206ENST00000428575 ABCC9O60706 1549 aa19.29■□□□□ 0.68
XRCC6-206ENST00000428575 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
XRCC6-206ENST00000428575 NACADO15069 1562 aa19.12■□□□□ 0.65
XRCC6-206ENST00000428575 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
XRCC6-206ENST00000428575 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
XRCC6-206ENST00000428575 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
XRCC6-206ENST00000428575 HRCP23327 699 aa18.59■□□□□ 0.57
XRCC6-206ENST00000428575 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
XRCC6-206ENST00000428575 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
XRCC6-206ENST00000428575 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
XRCC6-206ENST00000428575 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
XRCC6-206ENST00000428575 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
XRCC6-206ENST00000428575 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
XRCC6-206ENST00000428575 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
XRCC6-206ENST00000428575 WIZO95785 1651 aa18.31■□□□□ 0.52
XRCC6-206ENST00000428575 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
XRCC6-206ENST00000428575 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
XRCC6-206ENST00000428575 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
XRCC6-206ENST00000428575 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
XRCC6-206ENST00000428575 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
XRCC6-206ENST00000428575 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
XRCC6-206ENST00000428575 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
XRCC6-206ENST00000428575 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
XRCC6-206ENST00000428575 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
XRCC6-206ENST00000428575 MYT1Q01538 1121 aa17.9■□□□□ 0.46
XRCC6-206ENST00000428575 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
XRCC6-206ENST00000428575 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.44
XRCC6-206ENST00000428575 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
XRCC6-206ENST00000428575 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
XRCC6-206ENST00000428575 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
XRCC6-206ENST00000428575 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
XRCC6-206ENST00000428575 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
XRCC6-206ENST00000428575 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
XRCC6-206ENST00000428575 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
XRCC6-206ENST00000428575 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
XRCC6-206ENST00000428575 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
XRCC6-206ENST00000428575 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
XRCC6-206ENST00000428575 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
XRCC6-206ENST00000428575 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
XRCC6-206ENST00000428575 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
XRCC6-206ENST00000428575 SOGA1O94964 1423 aa17.43■□□□□ 0.38
XRCC6-206ENST00000428575 EEA1Q15075 1411 aa17.41■□□□□ 0.38
XRCC6-206ENST00000428575 CFTRP13569 1480 aa17.36■□□□□ 0.37
XRCC6-206ENST00000428575 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
XRCC6-206ENST00000428575 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
XRCC6-206ENST00000428575 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
XRCC6-206ENST00000428575 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
XRCC6-206ENST00000428575 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
XRCC6-206ENST00000428575 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
XRCC6-206ENST00000428575 CUX1P39880 1505 aa17.22■□□□□ 0.35
XRCC6-206ENST00000428575 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
XRCC6-206ENST00000428575 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
XRCC6-206ENST00000428575 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
XRCC6-206ENST00000428575 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
XRCC6-206ENST00000428575 KIF21BO75037 1637 aa17.17■□□□□ 0.34
XRCC6-206ENST00000428575 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
XRCC6-206ENST00000428575 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
XRCC6-206ENST00000428575 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.33
XRCC6-206ENST00000428575 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
XRCC6-206ENST00000428575 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
XRCC6-206ENST00000428575 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
XRCC6-206ENST00000428575 NESP48681 1621 aa17.02■□□□□ 0.32
XRCC6-206ENST00000428575 LAMC3Q9Y6N6 1575 aa17■□□□□ 0.31
XRCC6-206ENST00000428575 PRXQ9BXM0 1461 aa17■□□□□ 0.31
XRCC6-206ENST00000428575 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
XRCC6-206ENST00000428575 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
XRCC6-206ENST00000428575 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
XRCC6-206ENST00000428575 CLIP1P30622 1438 aa16.96■□□□□ 0.31
XRCC6-206ENST00000428575 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
XRCC6-206ENST00000428575 CUX2O14529 1486 aa16.95■□□□□ 0.3
XRCC6-206ENST00000428575 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
XRCC6-206ENST00000428575 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
XRCC6-206ENST00000428575 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
XRCC6-206ENST00000428575 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
XRCC6-206ENST00000428575 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
XRCC6-206ENST00000428575 IGF1RP08069 1367 aa16.87■□□□□ 0.29
XRCC6-206ENST00000428575 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
XRCC6-206ENST00000428575 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
XRCC6-206ENST00000428575 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
XRCC6-206ENST00000428575 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
XRCC6-206ENST00000428575 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
XRCC6-206ENST00000428575 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
XRCC6-206ENST00000428575 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
XRCC6-206ENST00000428575 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
XRCC6-206ENST00000428575 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
XRCC6-206ENST00000428575 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
XRCC6-206ENST00000428575 APLP2Q06481 763 aa16.73■□□□□ 0.27
XRCC6-206ENST00000428575 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
XRCC6-206ENST00000428575 CUL7Q14999 1698 aa16.68■□□□□ 0.26
XRCC6-206ENST00000428575 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
XRCC6-206ENST00000428575 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
XRCC6-206ENST00000428575 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
XRCC6-206ENST00000428575 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms