RNA–Protein interactions for RNA: ENST00000371103.8

LCOR-204, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LCOR, Length 10,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-204ENST00000371103 NISCHQ9Y2I1 1504 aa8.6□□□□□ -1.03
LCOR-204ENST00000371103 CCDC180Q9P1Z9 1646 aa7.48□□□□□ -1.21
LCOR-204ENST00000371103 DCAF1Q9Y4B6 1507 aa7.4□□□□□ -1.23
LCOR-204ENST00000371103 ZCCHC6Q5VYS8 1495 aaKnown RBP7.34□□□□□ -1.23
LCOR-204ENST00000371103 MYO15BQ96JP2 1530 aa7.25□□□□□ -1.25
LCOR-204ENST00000371103 MYT1Q01538 1121 aa7.1□□□□□ -1.27
LCOR-204ENST00000371103 PELP1Q8IZL8 1130 aaKnown RBP7.08□□□□□ -1.28
LCOR-204ENST00000371103 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
LCOR-204ENST00000371103 ABCC9O60706 1549 aa6.91□□□□□ -1.3
LCOR-204ENST00000371103 CHIC1Q5VXU3 224 aa6.91□□□□□ -1.3
LCOR-204ENST00000371103 HRCP23327 699 aa6.89□□□□□ -1.31
LCOR-204ENST00000371103 ZEB1P37275 1124 aaPredicted RBP6.86□□□□□ -1.31
LCOR-204ENST00000371103 NACADO15069 1562 aa6.84□□□□□ -1.31
LCOR-204ENST00000371103 RB1CC1Q8TDY2 1594 aa6.81□□□□□ -1.32
LCOR-204ENST00000371103 SUPT5HO00267 1087 aaKnown RBP6.77□□□□□ -1.33
LCOR-204ENST00000371103 DCAF8L2P0C7V8 631 aa6.76□□□□□ -1.33
LCOR-204ENST00000371103 RSF1Q96T23 1441 aaPredicted RBP6.75□□□□□ -1.33
LCOR-204ENST00000371103 EHMT2Q96KQ7 1210 aa6.74□□□□□ -1.33
LCOR-204ENST00000371103 TRIM26Q12899 539 aaPredicted RBP6.74□□□□□ -1.33
LCOR-204ENST00000371103 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
LCOR-204ENST00000371103 CCER1Q8TC90 406 aaPredicted RBP6.72□□□□□ -1.33
LCOR-204ENST00000371103 EEA1Q15075 1411 aa6.72□□□□□ -1.33
LCOR-204ENST00000371103 BAZ1AQ9NRL2 1556 aaPredicted RBP6.68□□□□□ -1.34
LCOR-204ENST00000371103 WRNQ14191 1432 aaPredicted RBP eCLIP6.67□□□□□ -1.34
LCOR-204ENST00000371103 EIF4G1Q04637 1599 aaKnown RBP6.61□□□□□ -1.35
LCOR-204ENST00000371103 PEG3Q9GZU2 1588 aa6.61□□□□□ -1.35
LCOR-204ENST00000371103 TOP2AP11388 1531 aaKnown RBP6.56□□□□□ -1.36
LCOR-204ENST00000371103 PCGF6Q9BYE7 350 aa6.56□□□□□ -1.36
LCOR-204ENST00000371103 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
LCOR-204ENST00000371103 TRIM41Q8WV44 630 aa6.54□□□□□ -1.36
LCOR-204ENST00000371103 TTBK1Q5TCY1 1321 aaPredicted RBP6.53□□□□□ -1.36
LCOR-204ENST00000371103 TNIKQ9UKE5 1360 aa6.52□□□□□ -1.37
LCOR-204ENST00000371103 SCRIBQ14160 1630 aa6.52□□□□□ -1.37
LCOR-204ENST00000371103 MROH2BQ7Z745 1585 aa6.51□□□□□ -1.37
LCOR-204ENST00000371103 DAXXQ9UER7 740 aaPredicted RBP6.51□□□□□ -1.37
LCOR-204ENST00000371103 YTHDC1Q96MU7 727 aaKnown RBP6.51□□□□□ -1.37
LCOR-204ENST00000371103 BAZ1BQ9UIG0 1483 aaKnown RBP6.49□□□□□ -1.37
LCOR-204ENST00000371103 SMARCA4P51532 1647 aa6.48□□□□□ -1.37
LCOR-204ENST00000371103 RANGAP1P46060 587 aaPredicted RBP6.48□□□□□ -1.37
LCOR-204ENST00000371103 NEFLP07196 543 aa6.46□□□□□ -1.38
LCOR-204ENST00000371103 KIF21BO75037 1637 aa6.45□□□□□ -1.38
LCOR-204ENST00000371103 CECR2Q9BXF3 1484 aa6.45□□□□□ -1.38
LCOR-204ENST00000371103 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
LCOR-204ENST00000371103 SMARCA2P51531 1590 aa6.44□□□□□ -1.38
LCOR-204ENST00000371103 CEP164Q9UPV0 1460 aa6.43□□□□□ -1.38
LCOR-204ENST00000371103 GOLGA3Q08378 1498 aa6.43□□□□□ -1.38
LCOR-204ENST00000371103 ERICH3Q5RHP9 1530 aa6.41□□□□□ -1.38
LCOR-204ENST00000371103 WIZO95785 1651 aa6.4□□□□□ -1.38
LCOR-204ENST00000371103 LOC105371045A0A1W2PR82 267 aa6.39□□□□□ -1.39
LCOR-204ENST00000371103 MAP3K1Q13233 1512 aa6.38□□□□□ -1.39
LCOR-204ENST00000371103 CEP162Q5TB80 1403 aa6.38□□□□□ -1.39
LCOR-204ENST00000371103 CCDC88BA6NC98 1476 aa6.37□□□□□ -1.39
LCOR-204ENST00000371103 APLP2Q06481 763 aa6.36□□□□□ -1.39
LCOR-204ENST00000371103 CSRNP3Q8WYN3 585 aa6.36□□□□□ -1.39
LCOR-204ENST00000371103 VPS8Q8N3P4 1428 aa6.36□□□□□ -1.39
LCOR-204ENST00000371103 HMGXB3Q12766 1538 aa6.36□□□□□ -1.39
LCOR-204ENST00000371103 ZNF316A6NFI3 1004 aaPredicted RBP6.35□□□□□ -1.39
LCOR-204ENST00000371103 CUX2O14529 1486 aa6.34□□□□□ -1.39
LCOR-204ENST00000371103 TIMELESSQ9UNS1 1208 aa6.34□□□□□ -1.4
LCOR-204ENST00000371103 ACIN1Q9UKV3 1341 aaKnown RBP6.33□□□□□ -1.4
LCOR-204ENST00000371103 RTL5Q5HYW3 569 aaPredicted RBP6.32□□□□□ -1.4
LCOR-204ENST00000371103 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
LCOR-204ENST00000371103 TOP2BQ02880 1626 aa6.31□□□□□ -1.4
LCOR-204ENST00000371103 BICRAQ9NZM4 1560 aa6.31□□□□□ -1.4
LCOR-204ENST00000371103 PRXQ9BXM0 1461 aa6.31□□□□□ -1.4
LCOR-204ENST00000371103 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
LCOR-204ENST00000371103 NCAPD3P42695 1498 aa6.3□□□□□ -1.4
LCOR-204ENST00000371103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.29□□□□□ -1.4
LCOR-204ENST00000371103 ATAD2BQ9ULI0 1458 aa6.29□□□□□ -1.4
LCOR-204ENST00000371103 UNC13AQ9UPW8 1703 aa6.28□□□□□ -1.4
LCOR-204ENST00000371103 EIF5BO60841 1220 aaKnown RBP6.28□□□□□ -1.4
LCOR-204ENST00000371103 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
LCOR-204ENST00000371103 CLIP1P30622 1438 aa6.27□□□□□ -1.41
LCOR-204ENST00000371103 PPARGC1BQ86YN6 1023 aaKnown RBP6.27□□□□□ -1.41
LCOR-204ENST00000371103 RRBP1Q9P2E9 1410 aaKnown RBP6.26□□□□□ -1.41
LCOR-204ENST00000371103 ATP1B4Q9UN42 357 aaPredicted RBP6.24□□□□□ -1.41
LCOR-204ENST00000371103 DIEXFQ68CQ4 756 aaKnown RBP6.24□□□□□ -1.41
LCOR-204ENST00000371103 BCL11AQ9H165 835 aa6.23□□□□□ -1.41
LCOR-204ENST00000371103 SYNJ1O43426 1573 aa6.23□□□□□ -1.41
LCOR-204ENST00000371103 CFTRP13569 1480 aa6.22□□□□□ -1.41
LCOR-204ENST00000371103 SOGA1O94964 1423 aa6.22□□□□□ -1.41
LCOR-204ENST00000371103 ABCC8Q09428 1581 aa6.21□□□□□ -1.42
LCOR-204ENST00000371103 KIF27Q86VH2 1401 aa6.21□□□□□ -1.42
LCOR-204ENST00000371103 AQRO60306 1485 aaKnown RBP eCLIP6.2□□□□□ -1.429e-7■■■■□ 21.8
LCOR-204ENST00000371103 SCAF1Q9H7N4 1312 aaKnown RBP6.2□□□□□ -1.42
LCOR-204ENST00000371103 FHAD1B1AJZ9 1412 aa6.19□□□□□ -1.42
LCOR-204ENST00000371103 PRDM2Q13029 1718 aa6.19□□□□□ -1.42
LCOR-204ENST00000371103 FAM9AQ8IZU1 332 aaPredicted RBP6.18□□□□□ -1.42
LCOR-204ENST00000371103 SLC4A1APQ9BWU0 796 aaKnown RBP6.18□□□□□ -1.42
LCOR-204ENST00000371103 EFCAB5A4FU69 1503 aa6.17□□□□□ -1.42
LCOR-204ENST00000371103 THOC2Q8NI27 1593 aaKnown RBP6.16□□□□□ -1.42
LCOR-204ENST00000371103 AKNAQ7Z591 1439 aa6.15□□□□□ -1.43
LCOR-204ENST00000371103 RAPGEF2Q9Y4G8 1499 aa6.14□□□□□ -1.43
LCOR-204ENST00000371103 AMER1Q5JTC6 1135 aaPredicted RBP6.13□□□□□ -1.43
LCOR-204ENST00000371103 DHX57Q6P158 1386 aaKnown RBP6.13□□□□□ -1.43
LCOR-204ENST00000371103 ERICH6BQ5W0A0 696 aa6.12□□□□□ -1.43
LCOR-204ENST00000371103 CCNB3Q8WWL7 1395 aa6.12□□□□□ -1.43
LCOR-204ENST00000371103 UBTFP17480 764 aaKnown RBP6.12□□□□□ -1.43
LCOR-204ENST00000371103 NEUROD1Q13562 356 aa6.12□□□□□ -1.43
LCOR-204ENST00000371103 CC2D2AQ9P2K1 1620 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms