RNA–Protein interactions for RNA: ENST00000360079.7

XRCC6-202, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,296 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-202ENST00000360079 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
XRCC6-202ENST00000360079 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
XRCC6-202ENST00000360079 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
XRCC6-202ENST00000360079 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
XRCC6-202ENST00000360079 ABCC9O60706 1549 aa26.26■■□□□ 1.79
XRCC6-202ENST00000360079 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
XRCC6-202ENST00000360079 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
XRCC6-202ENST00000360079 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
XRCC6-202ENST00000360079 NACADO15069 1562 aa25.64■■□□□ 1.69
XRCC6-202ENST00000360079 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
XRCC6-202ENST00000360079 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
XRCC6-202ENST00000360079 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
XRCC6-202ENST00000360079 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
XRCC6-202ENST00000360079 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
XRCC6-202ENST00000360079 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
XRCC6-202ENST00000360079 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
XRCC6-202ENST00000360079 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
XRCC6-202ENST00000360079 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
XRCC6-202ENST00000360079 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
XRCC6-202ENST00000360079 WIZO95785 1651 aa24.41■■□□□ 1.5
XRCC6-202ENST00000360079 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
XRCC6-202ENST00000360079 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
XRCC6-202ENST00000360079 TOP2AP11388 1531 aaKnown RBP24.03■■□□□ 1.44
XRCC6-202ENST00000360079 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
XRCC6-202ENST00000360079 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
XRCC6-202ENST00000360079 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
XRCC6-202ENST00000360079 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
XRCC6-202ENST00000360079 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
XRCC6-202ENST00000360079 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
XRCC6-202ENST00000360079 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
XRCC6-202ENST00000360079 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
XRCC6-202ENST00000360079 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
XRCC6-202ENST00000360079 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
XRCC6-202ENST00000360079 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
XRCC6-202ENST00000360079 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
XRCC6-202ENST00000360079 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
XRCC6-202ENST00000360079 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
XRCC6-202ENST00000360079 CFTRP13569 1480 aa23.26■■□□□ 1.31
XRCC6-202ENST00000360079 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
XRCC6-202ENST00000360079 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
XRCC6-202ENST00000360079 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
XRCC6-202ENST00000360079 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
XRCC6-202ENST00000360079 NESP48681 1621 aa23.11■■□□□ 1.29
XRCC6-202ENST00000360079 SOGA1O94964 1423 aa23.09■■□□□ 1.29
XRCC6-202ENST00000360079 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
XRCC6-202ENST00000360079 CUX1P39880 1505 aa22.99■■□□□ 1.27
XRCC6-202ENST00000360079 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
XRCC6-202ENST00000360079 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
XRCC6-202ENST00000360079 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
XRCC6-202ENST00000360079 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
XRCC6-202ENST00000360079 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
XRCC6-202ENST00000360079 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
XRCC6-202ENST00000360079 EEA1Q15075 1411 aa22.77■■□□□ 1.24
XRCC6-202ENST00000360079 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
XRCC6-202ENST00000360079 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
XRCC6-202ENST00000360079 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
XRCC6-202ENST00000360079 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
XRCC6-202ENST00000360079 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
XRCC6-202ENST00000360079 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
XRCC6-202ENST00000360079 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
XRCC6-202ENST00000360079 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
XRCC6-202ENST00000360079 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
XRCC6-202ENST00000360079 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
XRCC6-202ENST00000360079 CUX2O14529 1486 aa22.6■■□□□ 1.21
XRCC6-202ENST00000360079 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
XRCC6-202ENST00000360079 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
XRCC6-202ENST00000360079 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
XRCC6-202ENST00000360079 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
XRCC6-202ENST00000360079 KIF21BO75037 1637 aa22.52■■□□□ 1.2
XRCC6-202ENST00000360079 IGF1RP08069 1367 aa22.5■■□□□ 1.19
XRCC6-202ENST00000360079 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
XRCC6-202ENST00000360079 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
XRCC6-202ENST00000360079 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.19
XRCC6-202ENST00000360079 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
XRCC6-202ENST00000360079 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
XRCC6-202ENST00000360079 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
XRCC6-202ENST00000360079 RANGAP1P46060 587 aaPredicted RBP22.42■■□□□ 1.18
XRCC6-202ENST00000360079 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
XRCC6-202ENST00000360079 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
XRCC6-202ENST00000360079 WDR97A6NE52 1622 aa22.33■■□□□ 1.16
XRCC6-202ENST00000360079 TARBP1Q13395 1621 aaKnown RBP22.32■■□□□ 1.16
XRCC6-202ENST00000360079 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
XRCC6-202ENST00000360079 WDR62O43379 1518 aa22.31■■□□□ 1.16
XRCC6-202ENST00000360079 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
XRCC6-202ENST00000360079 CLIP1P30622 1438 aa22.27■■□□□ 1.16
XRCC6-202ENST00000360079 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.156e-7■■■■□ 22.3
XRCC6-202ENST00000360079 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
XRCC6-202ENST00000360079 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
XRCC6-202ENST00000360079 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
XRCC6-202ENST00000360079 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
XRCC6-202ENST00000360079 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
XRCC6-202ENST00000360079 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
XRCC6-202ENST00000360079 CUL7Q14999 1698 aa22.12■■□□□ 1.13
XRCC6-202ENST00000360079 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
XRCC6-202ENST00000360079 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
XRCC6-202ENST00000360079 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
XRCC6-202ENST00000360079 ARHGAP35Q9NRY4 1499 aa22.05■■□□□ 1.12
XRCC6-202ENST00000360079 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
XRCC6-202ENST00000360079 VPS8Q8N3P4 1428 aa22.04■■□□□ 1.12
XRCC6-202ENST00000360079 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms