Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 RNA5SP491-201ENST00000362936 118 ntBASIC14.36□□□□□ -0.11
LMO3Q8TAP4 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 SLC25A51P3-201ENST00000521814 889 ntBASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 TRMT112P3-201ENST00000580149 358 ntBASIC14.36□□□□□ -0.11
LMO3Q8TAP4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AL160287.1-203ENST00000637960 1061 ntBASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LMO3Q8TAP4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AC073862.3-201ENST00000624597 1648 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 RN7SL351P-201ENST00000469306 248 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MTHFD2P7-201ENST00000483867 983 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AP000920.1-201ENST00000531824 344 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AC211476.2-201ENST00000608799 708 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 COX6A1P2-201ENST00000620597 330 ntBASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 NEK11-202ENST00000383366 2914 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO3Q8TAP4 TUBB8P5-201ENST00000445286 1351 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC124319.4-201ENST00000622931 2161 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms