RNA–Protein interactions for RNA: ENST00000509242.5

ESRRB-204, Transcript of estrogen related receptor beta, humanhuman

TSL 1 (best) BASIC

Gene ESRRB, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-204ENST00000509242 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
ESRRB-204ENST00000509242 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
ESRRB-204ENST00000509242 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
ESRRB-204ENST00000509242 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
ESRRB-204ENST00000509242 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
ESRRB-204ENST00000509242 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
ESRRB-204ENST00000509242 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
ESRRB-204ENST00000509242 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
ESRRB-204ENST00000509242 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
ESRRB-204ENST00000509242 ABCC9O60706 1549 aa21.98■■□□□ 1.11
ESRRB-204ENST00000509242 SCRIBQ14160 1630 aa21.83■■□□□ 1.09
ESRRB-204ENST00000509242 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
ESRRB-204ENST00000509242 HRCP23327 699 aa21.71■■□□□ 1.07
ESRRB-204ENST00000509242 NACADO15069 1562 aa21.66■■□□□ 1.06
ESRRB-204ENST00000509242 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
ESRRB-204ENST00000509242 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
ESRRB-204ENST00000509242 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
ESRRB-204ENST00000509242 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
ESRRB-204ENST00000509242 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
ESRRB-204ENST00000509242 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
ESRRB-204ENST00000509242 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
ESRRB-204ENST00000509242 WIZO95785 1651 aa21.24■□□□□ 0.99
ESRRB-204ENST00000509242 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
ESRRB-204ENST00000509242 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
ESRRB-204ENST00000509242 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
ESRRB-204ENST00000509242 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
ESRRB-204ENST00000509242 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
ESRRB-204ENST00000509242 SMARCA4P51532 1647 aa20.95■□□□□ 0.94
ESRRB-204ENST00000509242 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
ESRRB-204ENST00000509242 ZEB1P37275 1124 aaPredicted RBP20.89■□□□□ 0.94
ESRRB-204ENST00000509242 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
ESRRB-204ENST00000509242 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
ESRRB-204ENST00000509242 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
ESRRB-204ENST00000509242 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
ESRRB-204ENST00000509242 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
ESRRB-204ENST00000509242 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
ESRRB-204ENST00000509242 EEA1Q15075 1411 aa20.58■□□□□ 0.88
ESRRB-204ENST00000509242 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
ESRRB-204ENST00000509242 SOGA1O94964 1423 aa20.55■□□□□ 0.88
ESRRB-204ENST00000509242 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
ESRRB-204ENST00000509242 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.88
ESRRB-204ENST00000509242 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
ESRRB-204ENST00000509242 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
ESRRB-204ENST00000509242 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
ESRRB-204ENST00000509242 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
ESRRB-204ENST00000509242 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
ESRRB-204ENST00000509242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
ESRRB-204ENST00000509242 SYNJ1O43426 1573 aa20.32■□□□□ 0.84
ESRRB-204ENST00000509242 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
ESRRB-204ENST00000509242 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
ESRRB-204ENST00000509242 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
ESRRB-204ENST00000509242 KIF21BO75037 1637 aa20.28■□□□□ 0.84
ESRRB-204ENST00000509242 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
ESRRB-204ENST00000509242 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
ESRRB-204ENST00000509242 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
ESRRB-204ENST00000509242 CLIP1P30622 1438 aa20.11■□□□□ 0.81
ESRRB-204ENST00000509242 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
ESRRB-204ENST00000509242 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
ESRRB-204ENST00000509242 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
ESRRB-204ENST00000509242 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
ESRRB-204ENST00000509242 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
ESRRB-204ENST00000509242 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
ESRRB-204ENST00000509242 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
ESRRB-204ENST00000509242 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
ESRRB-204ENST00000509242 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
ESRRB-204ENST00000509242 APLP2Q06481 763 aa19.9■□□□□ 0.78
ESRRB-204ENST00000509242 CUX1P39880 1505 aa19.88■□□□□ 0.77
ESRRB-204ENST00000509242 CFTRP13569 1480 aa19.87■□□□□ 0.77
ESRRB-204ENST00000509242 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
ESRRB-204ENST00000509242 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
ESRRB-204ENST00000509242 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
ESRRB-204ENST00000509242 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
ESRRB-204ENST00000509242 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
ESRRB-204ENST00000509242 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
ESRRB-204ENST00000509242 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
ESRRB-204ENST00000509242 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
ESRRB-204ENST00000509242 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
ESRRB-204ENST00000509242 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
ESRRB-204ENST00000509242 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
ESRRB-204ENST00000509242 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
ESRRB-204ENST00000509242 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
ESRRB-204ENST00000509242 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
ESRRB-204ENST00000509242 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
ESRRB-204ENST00000509242 IGF1RP08069 1367 aa19.59■□□□□ 0.73
ESRRB-204ENST00000509242 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.72
ESRRB-204ENST00000509242 CUX2O14529 1486 aa19.57■□□□□ 0.72
ESRRB-204ENST00000509242 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
ESRRB-204ENST00000509242 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
ESRRB-204ENST00000509242 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
ESRRB-204ENST00000509242 MIER1Q8N108 512 aa19.5■□□□□ 0.71
ESRRB-204ENST00000509242 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
ESRRB-204ENST00000509242 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
ESRRB-204ENST00000509242 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
ESRRB-204ENST00000509242 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
ESRRB-204ENST00000509242 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
ESRRB-204ENST00000509242 LRRC9Q6ZRR7 1453 aa19.36■□□□□ 0.69
ESRRB-204ENST00000509242 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
ESRRB-204ENST00000509242 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
ESRRB-204ENST00000509242 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
ESRRB-204ENST00000509242 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms