RNA–Protein interactions for RNA: ENST00000383366.8

NEK11-202, Transcript of NIMA related kinase 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEK11, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-202ENST00000383366 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
NEK11-202ENST00000383366 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
NEK11-202ENST00000383366 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
NEK11-202ENST00000383366 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
NEK11-202ENST00000383366 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
NEK11-202ENST00000383366 ABCC9O60706 1549 aa24.2■■□□□ 1.46
NEK11-202ENST00000383366 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
NEK11-202ENST00000383366 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
NEK11-202ENST00000383366 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
NEK11-202ENST00000383366 MYO15BQ96JP2 1530 aa23.56■■□□□ 1.36
NEK11-202ENST00000383366 NACADO15069 1562 aa23.53■■□□□ 1.36
NEK11-202ENST00000383366 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
NEK11-202ENST00000383366 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
NEK11-202ENST00000383366 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
NEK11-202ENST00000383366 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
NEK11-202ENST00000383366 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
NEK11-202ENST00000383366 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
NEK11-202ENST00000383366 BICRAQ9NZM4 1560 aa22.83■■□□□ 1.24
NEK11-202ENST00000383366 WIZO95785 1651 aa22.69■■□□□ 1.22
NEK11-202ENST00000383366 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
NEK11-202ENST00000383366 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
NEK11-202ENST00000383366 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
NEK11-202ENST00000383366 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
NEK11-202ENST00000383366 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
NEK11-202ENST00000383366 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
NEK11-202ENST00000383366 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
NEK11-202ENST00000383366 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.13
NEK11-202ENST00000383366 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
NEK11-202ENST00000383366 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
NEK11-202ENST00000383366 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
NEK11-202ENST00000383366 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
NEK11-202ENST00000383366 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
NEK11-202ENST00000383366 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
NEK11-202ENST00000383366 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
NEK11-202ENST00000383366 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
NEK11-202ENST00000383366 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
NEK11-202ENST00000383366 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
NEK11-202ENST00000383366 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
NEK11-202ENST00000383366 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
NEK11-202ENST00000383366 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
NEK11-202ENST00000383366 SOGA1O94964 1423 aa21.52■■□□□ 1.04
NEK11-202ENST00000383366 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
NEK11-202ENST00000383366 CFTRP13569 1480 aa21.42■■□□□ 1.02
NEK11-202ENST00000383366 NESP48681 1621 aa21.36■■□□□ 1.01
NEK11-202ENST00000383366 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
NEK11-202ENST00000383366 CUX1P39880 1505 aa21.29■■□□□ 1
NEK11-202ENST00000383366 TOP2BQ02880 1626 aa21.27■□□□□ 0.99
NEK11-202ENST00000383366 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
NEK11-202ENST00000383366 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
NEK11-202ENST00000383366 BIVM-ERCC5R4GMW8 1640 aa21.2■□□□□ 0.98
NEK11-202ENST00000383366 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
NEK11-202ENST00000383366 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
NEK11-202ENST00000383366 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
NEK11-202ENST00000383366 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
NEK11-202ENST00000383366 EEA1Q15075 1411 aa21.07■□□□□ 0.96
NEK11-202ENST00000383366 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
NEK11-202ENST00000383366 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
NEK11-202ENST00000383366 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
NEK11-202ENST00000383366 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
NEK11-202ENST00000383366 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
NEK11-202ENST00000383366 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
NEK11-202ENST00000383366 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
NEK11-202ENST00000383366 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
NEK11-202ENST00000383366 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
NEK11-202ENST00000383366 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
NEK11-202ENST00000383366 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
NEK11-202ENST00000383366 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
NEK11-202ENST00000383366 CUX2O14529 1486 aa20.93■□□□□ 0.94
NEK11-202ENST00000383366 KIF21BO75037 1637 aa20.91■□□□□ 0.94
NEK11-202ENST00000383366 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
NEK11-202ENST00000383366 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
NEK11-202ENST00000383366 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
NEK11-202ENST00000383366 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
NEK11-202ENST00000383366 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
NEK11-202ENST00000383366 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
NEK11-202ENST00000383366 IGF1RP08069 1367 aa20.82■□□□□ 0.92
NEK11-202ENST00000383366 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.91
NEK11-202ENST00000383366 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
NEK11-202ENST00000383366 CLIP1P30622 1438 aa20.73■□□□□ 0.91
NEK11-202ENST00000383366 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
NEK11-202ENST00000383366 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
NEK11-202ENST00000383366 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
NEK11-202ENST00000383366 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
NEK11-202ENST00000383366 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
NEK11-202ENST00000383366 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
NEK11-202ENST00000383366 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
NEK11-202ENST00000383366 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.88
NEK11-202ENST00000383366 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
NEK11-202ENST00000383366 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
NEK11-202ENST00000383366 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
NEK11-202ENST00000383366 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
NEK11-202ENST00000383366 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
NEK11-202ENST00000383366 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
NEK11-202ENST00000383366 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
NEK11-202ENST00000383366 WDR62O43379 1518 aa20.48■□□□□ 0.87
NEK11-202ENST00000383366 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
NEK11-202ENST00000383366 HRCP23327 699 aa20.44■□□□□ 0.86
NEK11-202ENST00000383366 CUL7Q14999 1698 aa20.42■□□□□ 0.86
NEK11-202ENST00000383366 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
NEK11-202ENST00000383366 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms