RNA–Protein interactions for RNA: ENST00000383693.7

LNP1-201, Transcript of leukemia NUP98 fusion partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LNP1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-201ENST00000383693 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
LNP1-201ENST00000383693 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.64
LNP1-201ENST00000383693 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
LNP1-201ENST00000383693 ABCC9O60706 1549 aa24.13■■□□□ 1.45
LNP1-201ENST00000383693 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
LNP1-201ENST00000383693 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
LNP1-201ENST00000383693 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
LNP1-201ENST00000383693 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
LNP1-201ENST00000383693 NACADO15069 1562 aa23.57■■□□□ 1.36
LNP1-201ENST00000383693 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
LNP1-201ENST00000383693 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
LNP1-201ENST00000383693 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
LNP1-201ENST00000383693 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
LNP1-201ENST00000383693 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
LNP1-201ENST00000383693 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
LNP1-201ENST00000383693 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
LNP1-201ENST00000383693 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
LNP1-201ENST00000383693 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
LNP1-201ENST00000383693 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
LNP1-201ENST00000383693 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
LNP1-201ENST00000383693 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
LNP1-201ENST00000383693 WIZO95785 1651 aa22.3■■□□□ 1.16
LNP1-201ENST00000383693 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
LNP1-201ENST00000383693 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.11
LNP1-201ENST00000383693 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
LNP1-201ENST00000383693 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
LNP1-201ENST00000383693 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
LNP1-201ENST00000383693 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
LNP1-201ENST00000383693 CC2D2AQ9P2K1 1620 aa21.82■■□□□ 1.08
LNP1-201ENST00000383693 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
LNP1-201ENST00000383693 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
LNP1-201ENST00000383693 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
LNP1-201ENST00000383693 HMGXB3Q12766 1538 aa21.73■■□□□ 1.07
LNP1-201ENST00000383693 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
LNP1-201ENST00000383693 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
LNP1-201ENST00000383693 HRCP23327 699 aa21.49■■□□□ 1.03
LNP1-201ENST00000383693 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
LNP1-201ENST00000383693 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
LNP1-201ENST00000383693 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
LNP1-201ENST00000383693 CFTRP13569 1480 aa21.25■□□□□ 0.99
LNP1-201ENST00000383693 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
LNP1-201ENST00000383693 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
LNP1-201ENST00000383693 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
LNP1-201ENST00000383693 NESP48681 1621 aa21.18■□□□□ 0.98
LNP1-201ENST00000383693 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
LNP1-201ENST00000383693 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
LNP1-201ENST00000383693 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
LNP1-201ENST00000383693 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.96
LNP1-201ENST00000383693 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
LNP1-201ENST00000383693 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
LNP1-201ENST00000383693 CUX1P39880 1505 aa20.99■□□□□ 0.95
LNP1-201ENST00000383693 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
LNP1-201ENST00000383693 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
LNP1-201ENST00000383693 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
LNP1-201ENST00000383693 SOGA1O94964 1423 aa20.88■□□□□ 0.93
LNP1-201ENST00000383693 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
LNP1-201ENST00000383693 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
LNP1-201ENST00000383693 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
LNP1-201ENST00000383693 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
LNP1-201ENST00000383693 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
LNP1-201ENST00000383693 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
LNP1-201ENST00000383693 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
LNP1-201ENST00000383693 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
LNP1-201ENST00000383693 EEA1Q15075 1411 aa20.67■□□□□ 0.9
LNP1-201ENST00000383693 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
LNP1-201ENST00000383693 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
LNP1-201ENST00000383693 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
LNP1-201ENST00000383693 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
LNP1-201ENST00000383693 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
LNP1-201ENST00000383693 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
LNP1-201ENST00000383693 CUX2O14529 1486 aa20.6■□□□□ 0.89
LNP1-201ENST00000383693 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
LNP1-201ENST00000383693 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
LNP1-201ENST00000383693 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
LNP1-201ENST00000383693 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
LNP1-201ENST00000383693 WDR62O43379 1518 aa20.55■□□□□ 0.88
LNP1-201ENST00000383693 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
LNP1-201ENST00000383693 KIF21BO75037 1637 aa20.51■□□□□ 0.87
LNP1-201ENST00000383693 UBTFP17480 764 aaKnown RBP20.5■□□□□ 0.87
LNP1-201ENST00000383693 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
LNP1-201ENST00000383693 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
LNP1-201ENST00000383693 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
LNP1-201ENST00000383693 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
LNP1-201ENST00000383693 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
LNP1-201ENST00000383693 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
LNP1-201ENST00000383693 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
LNP1-201ENST00000383693 IGF1RP08069 1367 aa20.41■□□□□ 0.86
LNP1-201ENST00000383693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
LNP1-201ENST00000383693 ERICH3Q5RHP9 1530 aa20.36■□□□□ 0.85
LNP1-201ENST00000383693 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
LNP1-201ENST00000383693 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
LNP1-201ENST00000383693 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
LNP1-201ENST00000383693 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
LNP1-201ENST00000383693 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
LNP1-201ENST00000383693 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
LNP1-201ENST00000383693 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
LNP1-201ENST00000383693 CUL7Q14999 1698 aa20.29■□□□□ 0.84
LNP1-201ENST00000383693 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
LNP1-201ENST00000383693 CLIP1P30622 1438 aa20.25■□□□□ 0.83
LNP1-201ENST00000383693 RANGAP1P46060 587 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms