RNA–Protein interactions for RNA: ENST00000374555.7

MDS2-201, Transcript of myelodysplastic syndrome 2 translocation associated, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MDS2, Length 1,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDS2-201ENST00000374555 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
MDS2-201ENST00000374555 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.38
MDS2-201ENST00000374555 ABCC9O60706 1549 aa29.68■■■□□ 2.34
MDS2-201ENST00000374555 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
MDS2-201ENST00000374555 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
MDS2-201ENST00000374555 NACADO15069 1562 aa28.25■■■□□ 2.11
MDS2-201ENST00000374555 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
MDS2-201ENST00000374555 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
MDS2-201ENST00000374555 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
MDS2-201ENST00000374555 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
MDS2-201ENST00000374555 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
MDS2-201ENST00000374555 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
MDS2-201ENST00000374555 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
MDS2-201ENST00000374555 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
MDS2-201ENST00000374555 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
MDS2-201ENST00000374555 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
MDS2-201ENST00000374555 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
MDS2-201ENST00000374555 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
MDS2-201ENST00000374555 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
MDS2-201ENST00000374555 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
MDS2-201ENST00000374555 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
MDS2-201ENST00000374555 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
MDS2-201ENST00000374555 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
MDS2-201ENST00000374555 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
MDS2-201ENST00000374555 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
MDS2-201ENST00000374555 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
MDS2-201ENST00000374555 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
MDS2-201ENST00000374555 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
MDS2-201ENST00000374555 WIZO95785 1651 aa25.58■■□□□ 1.69
MDS2-201ENST00000374555 NESP48681 1621 aa25.57■■□□□ 1.68
MDS2-201ENST00000374555 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
MDS2-201ENST00000374555 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
MDS2-201ENST00000374555 CUX2O14529 1486 aa25.4■■□□□ 1.66
MDS2-201ENST00000374555 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
MDS2-201ENST00000374555 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
MDS2-201ENST00000374555 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
MDS2-201ENST00000374555 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
MDS2-201ENST00000374555 THOC2Q8NI27 1593 aaKnown RBP25.21■■□□□ 1.63
MDS2-201ENST00000374555 CFTRP13569 1480 aa25.08■■□□□ 1.6
MDS2-201ENST00000374555 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
MDS2-201ENST00000374555 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
MDS2-201ENST00000374555 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
MDS2-201ENST00000374555 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
MDS2-201ENST00000374555 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
MDS2-201ENST00000374555 WDR62O43379 1518 aa24.96■■□□□ 1.59
MDS2-201ENST00000374555 PRDM2Q13029 1718 aa24.84■■□□□ 1.57
MDS2-201ENST00000374555 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
MDS2-201ENST00000374555 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
MDS2-201ENST00000374555 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
MDS2-201ENST00000374555 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
MDS2-201ENST00000374555 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
MDS2-201ENST00000374555 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
MDS2-201ENST00000374555 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
MDS2-201ENST00000374555 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
MDS2-201ENST00000374555 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
MDS2-201ENST00000374555 EIF4G3O43432 1585 aaKnown RBP24.32■■□□□ 1.48
MDS2-201ENST00000374555 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
MDS2-201ENST00000374555 SOGA1O94964 1423 aa24.28■■□□□ 1.48
MDS2-201ENST00000374555 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
MDS2-201ENST00000374555 CUX1P39880 1505 aa24.28■■□□□ 1.48
MDS2-201ENST00000374555 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
MDS2-201ENST00000374555 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
MDS2-201ENST00000374555 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
MDS2-201ENST00000374555 FBLN2P98095 1184 aa24.14■■□□□ 1.45
MDS2-201ENST00000374555 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
MDS2-201ENST00000374555 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
MDS2-201ENST00000374555 CHD1O14646 1710 aa24.07■■□□□ 1.44
MDS2-201ENST00000374555 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
MDS2-201ENST00000374555 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
MDS2-201ENST00000374555 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
MDS2-201ENST00000374555 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
MDS2-201ENST00000374555 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
MDS2-201ENST00000374555 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
MDS2-201ENST00000374555 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
MDS2-201ENST00000374555 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
MDS2-201ENST00000374555 BIVM-ERCC5R4GMW8 1640 aa23.98■■□□□ 1.43
MDS2-201ENST00000374555 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
MDS2-201ENST00000374555 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
MDS2-201ENST00000374555 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
MDS2-201ENST00000374555 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
MDS2-201ENST00000374555 PBRM1Q86U86 1689 aa23.93■■□□□ 1.42
MDS2-201ENST00000374555 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
MDS2-201ENST00000374555 ABCA5Q8WWZ7 1642 aa23.92■■□□□ 1.42
MDS2-201ENST00000374555 SYNJ2O15056 1496 aa23.9■■□□□ 1.42
MDS2-201ENST00000374555 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
MDS2-201ENST00000374555 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
MDS2-201ENST00000374555 ADAMTS12P58397 1594 aa23.73■■□□□ 1.39
MDS2-201ENST00000374555 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
MDS2-201ENST00000374555 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
MDS2-201ENST00000374555 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
MDS2-201ENST00000374555 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
MDS2-201ENST00000374555 CEP170Q5SW79 1584 aa23.59■■□□□ 1.37
MDS2-201ENST00000374555 NUP160Q12769 1436 aa23.59■■□□□ 1.37
MDS2-201ENST00000374555 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
MDS2-201ENST00000374555 IGF1RP08069 1367 aa23.48■■□□□ 1.35
MDS2-201ENST00000374555 TRHP20396 242 aaPredicted RBP23.45■■□□□ 1.34
MDS2-201ENST00000374555 CUL7Q14999 1698 aa23.44■■□□□ 1.34
MDS2-201ENST00000374555 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
MDS2-201ENST00000374555 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
MDS2-201ENST00000374555 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms