RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
EIF3CL-201ENST00000380876 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
EIF3CL-201ENST00000380876 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
EIF3CL-201ENST00000380876 HRCP23327 699 aa22.69■■□□□ 1.22
EIF3CL-201ENST00000380876 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.22
EIF3CL-201ENST00000380876 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.22
EIF3CL-201ENST00000380876 MYO15BQ96JP2 1530 aa22.45■■□□□ 1.18
EIF3CL-201ENST00000380876 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
EIF3CL-201ENST00000380876 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
EIF3CL-201ENST00000380876 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
EIF3CL-201ENST00000380876 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
EIF3CL-201ENST00000380876 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
EIF3CL-201ENST00000380876 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
EIF3CL-201ENST00000380876 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
EIF3CL-201ENST00000380876 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
EIF3CL-201ENST00000380876 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
EIF3CL-201ENST00000380876 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
EIF3CL-201ENST00000380876 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
EIF3CL-201ENST00000380876 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
EIF3CL-201ENST00000380876 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
EIF3CL-201ENST00000380876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.96
EIF3CL-201ENST00000380876 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
EIF3CL-201ENST00000380876 NEUROD1Q13562 356 aa21.03■□□□□ 0.96
EIF3CL-201ENST00000380876 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
EIF3CL-201ENST00000380876 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
EIF3CL-201ENST00000380876 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
EIF3CL-201ENST00000380876 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
EIF3CL-201ENST00000380876 YTHDC1Q96MU7 727 aaKnown RBP20.74■□□□□ 0.91
EIF3CL-201ENST00000380876 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
EIF3CL-201ENST00000380876 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
EIF3CL-201ENST00000380876 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
EIF3CL-201ENST00000380876 ABCC9O60706 1549 aa20.58■□□□□ 0.89
EIF3CL-201ENST00000380876 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
EIF3CL-201ENST00000380876 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
EIF3CL-201ENST00000380876 MIER1Q8N108 512 aa20.33■□□□□ 0.85
EIF3CL-201ENST00000380876 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.84
EIF3CL-201ENST00000380876 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
EIF3CL-201ENST00000380876 MYT1Q01538 1121 aa20.25■□□□□ 0.83
EIF3CL-201ENST00000380876 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
EIF3CL-201ENST00000380876 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
EIF3CL-201ENST00000380876 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
EIF3CL-201ENST00000380876 WIZO95785 1651 aa20.12■□□□□ 0.81
EIF3CL-201ENST00000380876 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
EIF3CL-201ENST00000380876 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
EIF3CL-201ENST00000380876 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
EIF3CL-201ENST00000380876 SOGA1O94964 1423 aa20.04■□□□□ 0.8
EIF3CL-201ENST00000380876 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
EIF3CL-201ENST00000380876 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
EIF3CL-201ENST00000380876 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
EIF3CL-201ENST00000380876 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
EIF3CL-201ENST00000380876 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
EIF3CL-201ENST00000380876 BCANQ96GW7 911 aa19.8■□□□□ 0.76
EIF3CL-201ENST00000380876 APLP2Q06481 763 aa19.78■□□□□ 0.76
EIF3CL-201ENST00000380876 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
EIF3CL-201ENST00000380876 KCNH8Q96L42 1107 aa19.72■□□□□ 0.75
EIF3CL-201ENST00000380876 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
EIF3CL-201ENST00000380876 TSHZ2Q9NRE2 1034 aa19.7■□□□□ 0.74
EIF3CL-201ENST00000380876 ITGAEP38570 1179 aa19.65■□□□□ 0.74
EIF3CL-201ENST00000380876 GOLGA3Q08378 1498 aa19.63■□□□□ 0.73
EIF3CL-201ENST00000380876 CLIP1P30622 1438 aa19.61■□□□□ 0.73
EIF3CL-201ENST00000380876 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
EIF3CL-201ENST00000380876 NACADO15069 1562 aa19.55■□□□□ 0.72
EIF3CL-201ENST00000380876 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
EIF3CL-201ENST00000380876 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
EIF3CL-201ENST00000380876 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.71
EIF3CL-201ENST00000380876 FKBP8Q14318 412 aa19.5■□□□□ 0.71
EIF3CL-201ENST00000380876 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
EIF3CL-201ENST00000380876 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
EIF3CL-201ENST00000380876 EEA1Q15075 1411 aa19.48■□□□□ 0.71
EIF3CL-201ENST00000380876 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
EIF3CL-201ENST00000380876 VPS8Q8N3P4 1428 aa19.45■□□□□ 0.7
EIF3CL-201ENST00000380876 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
EIF3CL-201ENST00000380876 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
EIF3CL-201ENST00000380876 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
EIF3CL-201ENST00000380876 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
EIF3CL-201ENST00000380876 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
EIF3CL-201ENST00000380876 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
EIF3CL-201ENST00000380876 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.69
EIF3CL-201ENST00000380876 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
EIF3CL-201ENST00000380876 KIF21BO75037 1637 aa19.3■□□□□ 0.68
EIF3CL-201ENST00000380876 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
EIF3CL-201ENST00000380876 RBM19Q9Y4C8 960 aaKnown RBP19.28■□□□□ 0.68
EIF3CL-201ENST00000380876 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
EIF3CL-201ENST00000380876 NEFLP07196 543 aa19.22■□□□□ 0.67
EIF3CL-201ENST00000380876 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
EIF3CL-201ENST00000380876 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
EIF3CL-201ENST00000380876 MSH5O43196 834 aa19.12■□□□□ 0.65
EIF3CL-201ENST00000380876 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
EIF3CL-201ENST00000380876 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
EIF3CL-201ENST00000380876 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
EIF3CL-201ENST00000380876 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
EIF3CL-201ENST00000380876 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
EIF3CL-201ENST00000380876 ANP32CO43423 234 aa19.04■□□□□ 0.64
EIF3CL-201ENST00000380876 WDR97A6NE52 1622 aa19.02■□□□□ 0.63
EIF3CL-201ENST00000380876 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.63
EIF3CL-201ENST00000380876 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
EIF3CL-201ENST00000380876 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
EIF3CL-201ENST00000380876 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
EIF3CL-201ENST00000380876 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
EIF3CL-201ENST00000380876 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms