RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
SHOC2-202ENST00000369452 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
SHOC2-202ENST00000369452 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
SHOC2-202ENST00000369452 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
SHOC2-202ENST00000369452 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.47
SHOC2-202ENST00000369452 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
SHOC2-202ENST00000369452 ABCC9O60706 1549 aa23.91■■□□□ 1.42
SHOC2-202ENST00000369452 SCRIBQ14160 1630 aa23.58■■□□□ 1.37
SHOC2-202ENST00000369452 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
SHOC2-202ENST00000369452 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
SHOC2-202ENST00000369452 NACADO15069 1562 aa23.4■■□□□ 1.34
SHOC2-202ENST00000369452 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
SHOC2-202ENST00000369452 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
SHOC2-202ENST00000369452 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
SHOC2-202ENST00000369452 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
SHOC2-202ENST00000369452 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
SHOC2-202ENST00000369452 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
SHOC2-202ENST00000369452 WIZO95785 1651 aa22.72■■□□□ 1.23
SHOC2-202ENST00000369452 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
SHOC2-202ENST00000369452 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
SHOC2-202ENST00000369452 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
SHOC2-202ENST00000369452 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
SHOC2-202ENST00000369452 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
SHOC2-202ENST00000369452 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
SHOC2-202ENST00000369452 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
SHOC2-202ENST00000369452 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
SHOC2-202ENST00000369452 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
SHOC2-202ENST00000369452 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
SHOC2-202ENST00000369452 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
SHOC2-202ENST00000369452 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
SHOC2-202ENST00000369452 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
SHOC2-202ENST00000369452 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
SHOC2-202ENST00000369452 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
SHOC2-202ENST00000369452 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
SHOC2-202ENST00000369452 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
SHOC2-202ENST00000369452 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
SHOC2-202ENST00000369452 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
SHOC2-202ENST00000369452 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
SHOC2-202ENST00000369452 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
SHOC2-202ENST00000369452 SOGA1O94964 1423 aa21.53■■□□□ 1.04
SHOC2-202ENST00000369452 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
SHOC2-202ENST00000369452 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
SHOC2-202ENST00000369452 CFTRP13569 1480 aa21.35■■□□□ 1.01
SHOC2-202ENST00000369452 TOP2BQ02880 1626 aa21.29■■□□□ 1
SHOC2-202ENST00000369452 CUX1P39880 1505 aa21.29■■□□□ 1
SHOC2-202ENST00000369452 PRDM2Q13029 1718 aa21.28■■□□□ 1
SHOC2-202ENST00000369452 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
SHOC2-202ENST00000369452 NESP48681 1621 aa21.23■□□□□ 0.99
SHOC2-202ENST00000369452 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
SHOC2-202ENST00000369452 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
SHOC2-202ENST00000369452 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
SHOC2-202ENST00000369452 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.96
SHOC2-202ENST00000369452 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
SHOC2-202ENST00000369452 EEA1Q15075 1411 aa21.01■□□□□ 0.95
SHOC2-202ENST00000369452 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
SHOC2-202ENST00000369452 KIF21BO75037 1637 aa20.99■□□□□ 0.95
SHOC2-202ENST00000369452 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
SHOC2-202ENST00000369452 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
SHOC2-202ENST00000369452 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
SHOC2-202ENST00000369452 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
SHOC2-202ENST00000369452 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
SHOC2-202ENST00000369452 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
SHOC2-202ENST00000369452 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
SHOC2-202ENST00000369452 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
SHOC2-202ENST00000369452 LAMC3Q9Y6N6 1575 aa20.86■□□□□ 0.93
SHOC2-202ENST00000369452 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
SHOC2-202ENST00000369452 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
SHOC2-202ENST00000369452 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
SHOC2-202ENST00000369452 DNMBPQ6XZF7 1577 aa20.81■□□□□ 0.92
SHOC2-202ENST00000369452 CUX2O14529 1486 aa20.8■□□□□ 0.92
SHOC2-202ENST00000369452 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
SHOC2-202ENST00000369452 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
SHOC2-202ENST00000369452 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
SHOC2-202ENST00000369452 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
SHOC2-202ENST00000369452 IGF1RP08069 1367 aa20.74■□□□□ 0.91
SHOC2-202ENST00000369452 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
SHOC2-202ENST00000369452 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
SHOC2-202ENST00000369452 WDR97A6NE52 1622 aa20.72■□□□□ 0.91
SHOC2-202ENST00000369452 CLIP1P30622 1438 aa20.68■□□□□ 0.9
SHOC2-202ENST00000369452 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
SHOC2-202ENST00000369452 HRCP23327 699 aa20.64■□□□□ 0.9
SHOC2-202ENST00000369452 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
SHOC2-202ENST00000369452 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
SHOC2-202ENST00000369452 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
SHOC2-202ENST00000369452 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
SHOC2-202ENST00000369452 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
SHOC2-202ENST00000369452 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
SHOC2-202ENST00000369452 ARHGAP35Q9NRY4 1499 aa20.53■□□□□ 0.88
SHOC2-202ENST00000369452 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
SHOC2-202ENST00000369452 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
SHOC2-202ENST00000369452 ZNF608Q9ULD9 1512 aaPredicted RBP20.41■□□□□ 0.86
SHOC2-202ENST00000369452 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.86
SHOC2-202ENST00000369452 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
SHOC2-202ENST00000369452 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
SHOC2-202ENST00000369452 CUL7Q14999 1698 aa20.39■□□□□ 0.86
SHOC2-202ENST00000369452 WDR62O43379 1518 aa20.39■□□□□ 0.85
SHOC2-202ENST00000369452 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
SHOC2-202ENST00000369452 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
SHOC2-202ENST00000369452 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
SHOC2-202ENST00000369452 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms