RNA–Protein interactions for RNA: ENST00000620597.2

COX6A1P2-201, Transcript of cytochrome c oxidase subunit 6A1 pseudogene 2, humanhuman

BASIC

Gene COX6A1P2, Length 330 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P2-201ENST00000620597 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
COX6A1P2-201ENST00000620597 ABCC9O60706 1549 aa31.75■■■□□ 2.67
COX6A1P2-201ENST00000620597 CCDC180Q9P1Z9 1646 aa31.68■■■□□ 2.66
COX6A1P2-201ENST00000620597 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
COX6A1P2-201ENST00000620597 NACADO15069 1562 aa29.98■■■□□ 2.39
COX6A1P2-201ENST00000620597 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
COX6A1P2-201ENST00000620597 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
COX6A1P2-201ENST00000620597 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
COX6A1P2-201ENST00000620597 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
COX6A1P2-201ENST00000620597 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.3
COX6A1P2-201ENST00000620597 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
COX6A1P2-201ENST00000620597 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
COX6A1P2-201ENST00000620597 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
COX6A1P2-201ENST00000620597 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
COX6A1P2-201ENST00000620597 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
COX6A1P2-201ENST00000620597 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
COX6A1P2-201ENST00000620597 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
COX6A1P2-201ENST00000620597 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
COX6A1P2-201ENST00000620597 NCAPD3P42695 1498 aa27.64■■■□□ 2.02
COX6A1P2-201ENST00000620597 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
COX6A1P2-201ENST00000620597 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
COX6A1P2-201ENST00000620597 SMARCA2P51531 1590 aa27.52■■■□□ 2
COX6A1P2-201ENST00000620597 CUX2O14529 1486 aa27.51■■■□□ 2
COX6A1P2-201ENST00000620597 ERCC6Q03468 1493 aa27.51■■■□□ 2
COX6A1P2-201ENST00000620597 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
COX6A1P2-201ENST00000620597 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
COX6A1P2-201ENST00000620597 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
COX6A1P2-201ENST00000620597 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
COX6A1P2-201ENST00000620597 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
COX6A1P2-201ENST00000620597 NESP48681 1621 aa27.19■■□□□ 1.94
COX6A1P2-201ENST00000620597 LAMC3Q9Y6N6 1575 aa27.09■■□□□ 1.93
COX6A1P2-201ENST00000620597 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
COX6A1P2-201ENST00000620597 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
COX6A1P2-201ENST00000620597 PDS5BQ9NTI5 1447 aa26.95■■□□□ 1.9
COX6A1P2-201ENST00000620597 KIF21AQ7Z4S6 1674 aa26.88■■□□□ 1.89
COX6A1P2-201ENST00000620597 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
COX6A1P2-201ENST00000620597 WIZO95785 1651 aa26.71■■□□□ 1.87
COX6A1P2-201ENST00000620597 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
COX6A1P2-201ENST00000620597 WDR62O43379 1518 aa26.63■■□□□ 1.85
COX6A1P2-201ENST00000620597 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
COX6A1P2-201ENST00000620597 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
COX6A1P2-201ENST00000620597 CFTRP13569 1480 aa26.46■■□□□ 1.83
COX6A1P2-201ENST00000620597 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
COX6A1P2-201ENST00000620597 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
COX6A1P2-201ENST00000620597 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
COX6A1P2-201ENST00000620597 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
COX6A1P2-201ENST00000620597 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
COX6A1P2-201ENST00000620597 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
COX6A1P2-201ENST00000620597 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
COX6A1P2-201ENST00000620597 IFT140Q96RY7 1462 aa26.05■■□□□ 1.76
COX6A1P2-201ENST00000620597 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
COX6A1P2-201ENST00000620597 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
COX6A1P2-201ENST00000620597 ZNF608Q9ULD9 1512 aaPredicted RBP25.94■■□□□ 1.74
COX6A1P2-201ENST00000620597 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
COX6A1P2-201ENST00000620597 EIF4G3O43432 1585 aaKnown RBP25.85■■□□□ 1.73
COX6A1P2-201ENST00000620597 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
COX6A1P2-201ENST00000620597 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
COX6A1P2-201ENST00000620597 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
COX6A1P2-201ENST00000620597 ARHGEF11O15085 1522 aa25.76■■□□□ 1.71
COX6A1P2-201ENST00000620597 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
COX6A1P2-201ENST00000620597 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.7
COX6A1P2-201ENST00000620597 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
COX6A1P2-201ENST00000620597 CHD1O14646 1710 aa25.66■■□□□ 1.7
COX6A1P2-201ENST00000620597 FBLN2P98095 1184 aa25.6■■□□□ 1.69
COX6A1P2-201ENST00000620597 SOGA1O94964 1423 aa25.58■■□□□ 1.69
COX6A1P2-201ENST00000620597 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
COX6A1P2-201ENST00000620597 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
COX6A1P2-201ENST00000620597 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
COX6A1P2-201ENST00000620597 TDRD9Q8NDG6 1382 aaKnown RBP25.51■■□□□ 1.67
COX6A1P2-201ENST00000620597 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
COX6A1P2-201ENST00000620597 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
COX6A1P2-201ENST00000620597 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
COX6A1P2-201ENST00000620597 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
COX6A1P2-201ENST00000620597 CUX1P39880 1505 aa25.43■■□□□ 1.66
COX6A1P2-201ENST00000620597 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
COX6A1P2-201ENST00000620597 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
COX6A1P2-201ENST00000620597 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
COX6A1P2-201ENST00000620597 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
COX6A1P2-201ENST00000620597 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
COX6A1P2-201ENST00000620597 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
COX6A1P2-201ENST00000620597 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
COX6A1P2-201ENST00000620597 PBRM1Q86U86 1689 aa25.27■■□□□ 1.64
COX6A1P2-201ENST00000620597 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
COX6A1P2-201ENST00000620597 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
COX6A1P2-201ENST00000620597 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
COX6A1P2-201ENST00000620597 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
COX6A1P2-201ENST00000620597 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
COX6A1P2-201ENST00000620597 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
COX6A1P2-201ENST00000620597 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
COX6A1P2-201ENST00000620597 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
COX6A1P2-201ENST00000620597 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
COX6A1P2-201ENST00000620597 NUP160Q12769 1436 aa24.97■■□□□ 1.59
COX6A1P2-201ENST00000620597 CEP170Q5SW79 1584 aa24.95■■□□□ 1.58
COX6A1P2-201ENST00000620597 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
COX6A1P2-201ENST00000620597 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
COX6A1P2-201ENST00000620597 SHROOM2Q13796 1616 aa24.88■■□□□ 1.57
COX6A1P2-201ENST00000620597 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
COX6A1P2-201ENST00000620597 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
COX6A1P2-201ENST00000620597 JPH4Q96JJ6 628 aa24.7■■□□□ 1.54
COX6A1P2-201ENST00000620597 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms