Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.165e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-209ENST00000495501 832 ntTSL 524.03■■□□□ 1.447e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.197e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.98□□□□□ -0.017e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.017e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.287e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC13.1□□□□□ -0.317e-6■■□□□ 13.5
DDX52Q9Y2R4 AKR1C1-203ENST00000442997 744 ntTSL 312.36□□□□□ -0.437e-6■■□□□ 13.5
DDX52Q9Y2R4 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.497e-6■■□□□ 13.5
DDX52Q9Y2R4 LDHAP7-201ENST00000398295 965 ntBASIC10.67□□□□□ -0.77e-6■■□□□ 13.5
DDX52Q9Y2R4 AKR1C1-205ENST00000477661 2637 ntTSL 58.55□□□□□ -1.047e-6■■□□□ 13.5
DDX52Q9Y2R4 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.117e-6■■□□□ 13.5
DDX52Q9Y2R4 LARP1-204ENST00000518297 2630 ntTSL 523.36■■□□□ 1.331e-7■■□□□ 13.5
DDX52Q9Y2R4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.773e-6■■□□□ 13.4
DDX52Q9Y2R4 GRB10-212ENST00000439044 733 ntTSL 526.29■■□□□ 1.82e-6■■□□□ 13.4
DDX52Q9Y2R4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.78■■□□□ 1.42e-6■■□□□ 13.4
DDX52Q9Y2R4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.97■□□□□ 0.792e-6■■□□□ 13.4
DDX52Q9Y2R4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.18■□□□□ 0.52e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.8■■□□□ 1.081e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-210ENST00000586944 4661 ntTSL 218.61■□□□□ 0.571e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.72■□□□□ 0.431e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.221e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.04■□□□□ 0.161e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-213ENST00000587191 357 ntTSL 513.74□□□□□ -0.211e-6■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-209ENST00000586481 578 ntTSL 323.61■■□□□ 1.374e-7■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-214ENST00000589575 749 ntTSL 315.49■□□□□ 0.074e-7■■□□□ 13.4
DDX52Q9Y2R4 PTBP1-216ENST00000590887 642 ntTSL 315.21■□□□□ 0.034e-7■■□□□ 13.4
DDX52Q9Y2R4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.428e-9■■□□□ 13.3
DDX52Q9Y2R4 SYNCRIP-203ENST00000444272 610 ntTSL 316.49■□□□□ 0.238e-9■■□□□ 13.3
DDX52Q9Y2R4 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.368e-9■■□□□ 13.3
DDX52Q9Y2R4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.09■■□□□ 1.292e-6■■□□□ 13.3
DDX52Q9Y2R4 ZNF276-204ENST00000562530 1826 ntTSL 218.79■□□□□ 0.62e-6■■□□□ 13.3
DDX52Q9Y2R4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.5■□□□□ 0.232e-6■■□□□ 13.3
DDX52Q9Y2R4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.54■■■□□ 2.164e-7■■□□□ 13.3
DDX52Q9Y2R4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.554e-7■■□□□ 13.3
DDX52Q9Y2R4 LMAN2-207ENST00000514458 616 ntTSL 524.52■■□□□ 1.524e-7■■□□□ 13.3
DDX52Q9Y2R4 LMAN2-204ENST00000504071 562 ntTSL 221.63■■□□□ 1.054e-7■■□□□ 13.3
DDX52Q9Y2R4 FAM229A-201ENST00000415596 446 ntTSL 318.23■□□□□ 0.514e-7■■□□□ 13.3
DDX52Q9Y2R4 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.414e-7■■□□□ 13.3
DDX52Q9Y2R4 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.15□□□□□ -0.943e-8■■□□□ 13.2
DDX52Q9Y2R4 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.97□□□□□ -0.812e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC33.57■■■□□ 2.964e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.694e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.564e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.544e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.534e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.954e-6■■□□□ 13.2
DDX52Q9Y2R4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.854e-6■■□□□ 13.2
DDX52Q9Y2R4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.494e-7■■□□□ 13.2
DDX52Q9Y2R4 EFHC1-204ENST00000491749 496 ntTSL 429.57■■■□□ 2.324e-6■■□□□ 13.2
DDX52Q9Y2R4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.39■■□□□ 1.174e-6■■□□□ 13.2
DDX52Q9Y2R4 EFHC1-235ENST00000637849 2746 ntTSL 518.46■□□□□ 0.554e-6■■□□□ 13.2
DDX52Q9Y2R4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.5■□□□□ 0.394e-6■■□□□ 13.2
DDX52Q9Y2R4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.274e-6■■□□□ 13.2
DDX52Q9Y2R4 PAQR8-203ENST00000512121 582 ntTSL 315.62■□□□□ 0.094e-6■■□□□ 13.2
DDX52Q9Y2R4 ADARB1-208ENST00000462214 587 ntTSL 39.75□□□□□ -0.855e-7■■□□□ 13.2
DDX52Q9Y2R4 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)28.86■■■□□ 2.219e-7■■□□□ 13.2
DDX52Q9Y2R4 STAT5B-203ENST00000468312 1799 ntTSL 1 (best)27.14■■□□□ 1.943e-17■■□□□ 13.1
DDX52Q9Y2R4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.283e-17■■□□□ 13.1
DDX52Q9Y2R4 STAT5B-202ENST00000415845 559 ntTSL 48.03□□□□□ -1.123e-17■■□□□ 13.1
DDX52Q9Y2R4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.29■□□□□ 0.043e-6■■□□□ 13.1
DDX52Q9Y2R4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.985e-7■■□□□ 13.1
DDX52Q9Y2R4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.545e-7■■□□□ 13.1
DDX52Q9Y2R4 ZYX-205ENST00000446634 926 ntTSL 522.43■■□□□ 1.185e-7■■□□□ 13.1
DDX52Q9Y2R4 ZYX-204ENST00000436448 632 ntTSL 421.35■■□□□ 1.015e-7■■□□□ 13.1
DDX52Q9Y2R4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.65■□□□□ 0.745e-7■■□□□ 13.1
DDX52Q9Y2R4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.565e-7■■□□□ 13.1
DDX52Q9Y2R4 BCL6-210ENST00000496823 1138 ntTSL 316.5■□□□□ 0.235e-7■■□□□ 13.1
DDX52Q9Y2R4 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.075e-7■■□□□ 13.1
DDX52Q9Y2R4 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)14.05□□□□□ -0.165e-7■■□□□ 13.1
DDX52Q9Y2R4 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC13.08□□□□□ -0.325e-7■■□□□ 13.1
DDX52Q9Y2R4 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.665e-7■■□□□ 13.1
DDX52Q9Y2R4 BCL6-209ENST00000480458 342 ntTSL 59.89□□□□□ -0.835e-7■■□□□ 13.1
DDX52Q9Y2R4 BCL6-207ENST00000470319 526 ntTSL 42.94□□□□□ -1.945e-7■■□□□ 13.1
DDX52Q9Y2R4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.452e-6■■□□□ 13
DDX52Q9Y2R4 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.911e-11■■□□□ 13
DDX52Q9Y2R4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.41■■□□□ 1.987e-6■■□□□ 13
DDX52Q9Y2R4 SPIRE2-209ENST00000566337 1369 ntTSL 526.91■■□□□ 1.97e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.26■■□□□ 1.637e-6■■□□□ 13
DDX52Q9Y2R4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.537e-6■■□□□ 13
DDX52Q9Y2R4 KLHDC2-207ENST00000555443 1756 ntTSL 224.03■■□□□ 1.447e-6■■□□□ 13
DDX52Q9Y2R4 KLHDC2-208ENST00000555739 1696 ntTSL 523.55■■□□□ 1.367e-6■■□□□ 13
DDX52Q9Y2R4 SPIRE2-206ENST00000564878 663 ntTSL 321.37■■□□□ 1.017e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.28■■□□□ 17e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-207ENST00000609262 540 ntTSL 1 (best)20.94■□□□□ 0.947e-6■■□□□ 13
DDX52Q9Y2R4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.9■□□□□ 0.947e-6■■□□□ 13
DDX52Q9Y2R4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.97e-6■■□□□ 13
DDX52Q9Y2R4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.877e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)20.24■□□□□ 0.837e-6■■□□□ 13
DDX52Q9Y2R4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.56■□□□□ 0.567e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.15■□□□□ 0.57e-6■■□□□ 13
DDX52Q9Y2R4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.217e-6■■□□□ 13
DDX52Q9Y2R4 SMAD3-213ENST00000560175 542 ntTSL 415.76■□□□□ 0.117e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.027e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC15.02■□□□□ -07e-6■■□□□ 13
DDX52Q9Y2R4 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC14.83□□□□□ -0.047e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.537e-6■■□□□ 13
DDX52Q9Y2R4 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC11.38□□□□□ -0.597e-6■■□□□ 13
DDX52Q9Y2R4 SMAD3-211ENST00000559460 568 ntTSL 411.26□□□□□ -0.617e-6■■□□□ 13
Retrieved 100 of 4,483 protein–RNA pairs in 53.1 ms