Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NOP56-214ENST00000484998 998 ntTSL 517.7■□□□□ 0.423e-6■■■□□ 16.3
PABPN1Q86U42 OXA1L-207ENST00000481218 1596 ntTSL 516.5■□□□□ 0.232e-8■■■□□ 16.3
PABPN1Q86U42 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-8■■■□□ 16.3
PABPN1Q86U42 XRCC5-209ENST00000485763 616 ntTSL 213.62□□□□□ -0.232e-11■■■□□ 16.3
PABPN1Q86U42 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.242e-11■■■□□ 16.3
PABPN1Q86U42 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.822e-11■■■□□ 16.3
PABPN1Q86U42 XRCC5-206ENST00000460284 2962 ntTSL 1 (best)8.06□□□□□ -1.122e-11■■■□□ 16.3
PABPN1Q86U42 MST1-219ENST00000494828 621 ntTSL 429.05■■■□□ 2.241e-10■■■□□ 16.3
PABPN1Q86U42 MST1-213ENST00000490966 829 ntTSL 527.3■■□□□ 1.961e-10■■■□□ 16.3
PABPN1Q86U42 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.041e-6■■■□□ 16.3
PABPN1Q86U42 PAH-201ENST00000307000 2466 ntTSL 5 BASIC12.91□□□□□ -0.341e-6■■■□□ 16.3
PABPN1Q86U42 PFKL-209ENST00000495274 951 ntTSL 231.83■■■□□ 2.697e-7■■■□□ 16.3
PABPN1Q86U42 ABCB6-207ENST00000485773 962 ntTSL 227.31■■□□□ 1.961e-6■■■□□ 16.3
PABPN1Q86U42 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC44.51■■■■■ 4.724e-7■■■□□ 16.3
PABPN1Q86U42 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC32.12■■■□□ 2.734e-7■■■□□ 16.3
PABPN1Q86U42 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC25.9■■□□□ 1.744e-7■■■□□ 16.3
PABPN1Q86U42 PAH-218ENST00000635528 960 ntTSL 312.62□□□□□ -0.392e-7■■■□□ 16.3
PABPN1Q86U42 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC30.72■■■□□ 2.518e-7■■■□□ 16.3
PABPN1Q86U42 CTTN-213ENST00000529736 952 ntTSL 330.13■■■□□ 2.418e-7■■■□□ 16.3
PABPN1Q86U42 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.778e-7■■■□□ 16.3
PABPN1Q86U42 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.928e-7■■■□□ 16.3
PABPN1Q86U42 THOC5-213ENST00000475187 1935 ntTSL 1 (best)22.65■■□□□ 1.222e-8■■■□□ 16.3
PABPN1Q86U42 THOC5-208ENST00000440771 1006 ntTSL 314.84□□□□□ -0.032e-8■■■□□ 16.3
PABPN1Q86U42 IARS-205ENST00000443024 4341 ntTSL 5 BASIC13.63□□□□□ -0.234e-9■■■□□ 16.3
PABPN1Q86U42 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC12.84□□□□□ -0.354e-9■■■□□ 16.3
PABPN1Q86U42 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.84e-9■■■□□ 16.3
PABPN1Q86U42 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.73□□□□□ -1.014e-9■■■□□ 16.3
PABPN1Q86U42 KAT2A-204ENST00000588759 404 ntTSL 516.3■□□□□ 0.23e-9■■■□□ 16.3
PABPN1Q86U42 CPSF1-204ENST00000529288 588 ntTSL 226.96■■□□□ 1.913e-8■■■□□ 16.3
PABPN1Q86U42 STAT6-216ENST00000555318 465 ntTSL 312.2□□□□□ -0.466e-7■■■□□ 16.2
PABPN1Q86U42 HDAC6-218ENST00000470942 668 ntTSL 331.51■■■□□ 2.631e-7■■■□□ 16.2
PABPN1Q86U42 HDAC6-229ENST00000486665 598 ntTSL 225.38■■□□□ 1.651e-7■■■□□ 16.2
PABPN1Q86U42 PIH1D1-216ENST00000598889 615 ntTSL 537.92■■■■□ 3.661e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-221ENST00000601807 998 ntTSL 535.14■■■■□ 3.221e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.131e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-202ENST00000593629 1084 ntTSL 334.61■■■■□ 3.131e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-214ENST00000597577 698 ntTSL 534.61■■■■□ 3.131e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-210ENST00000596651 741 ntTSL 334.61■■■■□ 3.131e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-204ENST00000594845 489 ntTSL 534.61■■■■□ 3.131e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-212ENST00000596916 793 ntTSL 532.86■■■□□ 2.851e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-215ENST00000598175 418 ntTSL 532.86■■■□□ 2.851e-6■■■□□ 16.2
PABPN1Q86U42 SMPD4-220ENST00000491319 593 ntTSL 232.69■■■□□ 2.821e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.781e-6■■■□□ 16.2
PABPN1Q86U42 PIH1D1-219ENST00000600875 633 ntTSL 526.32■■□□□ 1.81e-6■■■□□ 16.2
PABPN1Q86U42 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.037e-7■■■□□ 16.2
PABPN1Q86U42 PLCG1-217ENST00000609257 956 ntTSL 524.9■■□□□ 1.582e-9■■■□□ 16.2
PABPN1Q86U42 ARFGAP1-214ENST00000520485 1548 ntTSL 243.22■■■■■ 4.516e-14■■■□□ 16.2
PABPN1Q86U42 ARFGAP1-207ENST00000518618 1244 ntTSL 236.21■■■■□ 3.396e-14■■■□□ 16.2
PABPN1Q86U42 MAN2C1-219ENST00000564570 803 ntTSL 542.89■■■■■ 4.467e-7■■■□□ 16.2
PABPN1Q86U42 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC33.96■■■■□ 3.034e-7■■■□□ 16.2
PABPN1Q86U42 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.54e-7■■■□□ 16.2
PABPN1Q86U42 RBM6-202ENST00000419610 2128 ntTSL 234.03■■■■□ 3.044e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC31.5■■■□□ 2.634e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC27.8■■■□□ 2.044e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC21.25■□□□□ 0.994e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.814e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-213ENST00000454079 4324 ntTSL 219.42■□□□□ 0.74e-11■■■□□ 16.2
PABPN1Q86U42 RBM6-207ENST00000434592 2342 ntTSL 212.89□□□□□ -0.354e-11■■■□□ 16.2
PABPN1Q86U42 COL9A2-208ENST00000488463 1005 ntTSL 528.57■■■□□ 2.163e-7■■■□□ 16.2
PABPN1Q86U42 DOCK5-207ENST00000479547 1042 ntTSL 518.81■□□□□ 0.62e-6■■■□□ 16.2
PABPN1Q86U42 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.582e-6■■■□□ 16.2
PABPN1Q86U42 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC42.89■■■■■ 4.469e-7■■■□□ 16.2
PABPN1Q86U42 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC35.25■■■■□ 3.239e-7■■■□□ 16.2
PABPN1Q86U42 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC31.06■■■□□ 2.569e-7■■■□□ 16.2
PABPN1Q86U42 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC19.96■□□□□ 0.799e-7■■■□□ 16.2
PABPN1Q86U42 LCAT-206ENST00000573846 568 ntTSL 238.51■■■■□ 3.769e-7■■■□□ 16.2
PABPN1Q86U42 LCAT-208ENST00000575467 842 ntTSL 537.96■■■■□ 3.679e-7■■■□□ 16.2
PABPN1Q86U42 LCAT-207ENST00000575277 573 ntTSL 235.22■■■■□ 3.239e-7■■■□□ 16.2
PABPN1Q86U42 SHC1-207ENST00000414115 780 ntTSL 331.95■■■□□ 2.711e-6■■■□□ 16.2
PABPN1Q86U42 SHC1-208ENST00000444179 550 ntTSL 222.7■■□□□ 1.221e-6■■■□□ 16.2
PABPN1Q86U42 SYMPK-211ENST00000598364 995 ntTSL 332.18■■■□□ 2.741e-6■■■□□ 16.2
PABPN1Q86U42 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC39.07■■■■□ 3.842e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.452e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.422e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.362e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.332e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-224ENST00000584460 1855 ntTSL 228.91■■■□□ 2.222e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC28.13■■■□□ 2.092e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC27.9■■■□□ 2.062e-7■■■□□ 16.2
PABPN1Q86U42 GPS1-203ENST00000392357 4076 ntTSL 1 (best)21.45■■□□□ 1.032e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.13e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC21.46■■□□□ 1.033e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-212ENST00000452250 2625 ntTSL 221.22■□□□□ 0.993e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-202ENST00000382162 5250 ntTSL 219.78■□□□□ 0.763e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.433e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.263e-7■■■□□ 16.2
PABPN1Q86U42 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.253e-7■■■□□ 16.2
PABPN1Q86U42 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC13.47□□□□□ -0.254e-8■■■□□ 16.1
PABPN1Q86U42 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.254e-8■■■□□ 16.1
PABPN1Q86U42 PTOV1-205ENST00000595934 1880 nt41.06■■■■■ 4.164e-6■■■□□ 16.1
PABPN1Q86U42 PTOV1-213ENST00000600105 635 ntTSL 340.91■■■■■ 4.144e-6■■■□□ 16.1
PABPN1Q86U42 PTOV1-207ENST00000596424 625 ntTSL 237.22■■■■□ 3.554e-6■■■□□ 16.1
PABPN1Q86U42 PTOV1-203ENST00000594165 986 ntTSL 337.19■■■■□ 3.544e-6■■■□□ 16.1
PABPN1Q86U42 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.671e-7■■■□□ 16.1
PABPN1Q86U42 EPS8L2-211ENST00000527832 1597 ntTSL 241.26■■■■■ 4.24e-12■■■□□ 16.1
PABPN1Q86U42 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC54.55■■■■■ 6.325e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-209ENST00000510558 1051 ntTSL 546.83■■■■■ 5.095e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-217ENST00000576353 700 ntTSL 546.61■■■■■ 5.055e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-216ENST00000573795 583 ntTSL 546.36■■■■■ 5.015e-8■■■□□ 16.1
PABPN1Q86U42 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC39.92■■■■□ 3.985e-8■■■□□ 16.1
Retrieved 100 of 8,254 protein–RNA pairs in 195 ms