RNA–Protein interactions for RNA: ENST00000400288.6

SFI1-203, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFI1, Length 4,002 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-203ENST00000400288 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
SFI1-203ENST00000400288 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
SFI1-203ENST00000400288 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
SFI1-203ENST00000400288 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
SFI1-203ENST00000400288 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
SFI1-203ENST00000400288 HRCP23327 699 aa18.84■□□□□ 0.61
SFI1-203ENST00000400288 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
SFI1-203ENST00000400288 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
SFI1-203ENST00000400288 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
SFI1-203ENST00000400288 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
SFI1-203ENST00000400288 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
SFI1-203ENST00000400288 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
SFI1-203ENST00000400288 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
SFI1-203ENST00000400288 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
SFI1-203ENST00000400288 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
SFI1-203ENST00000400288 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
SFI1-203ENST00000400288 MYT1Q01538 1121 aa18.03■□□□□ 0.48
SFI1-203ENST00000400288 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
SFI1-203ENST00000400288 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
SFI1-203ENST00000400288 YTHDC1Q96MU7 727 aaKnown RBP17.89■□□□□ 0.46
SFI1-203ENST00000400288 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
SFI1-203ENST00000400288 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
SFI1-203ENST00000400288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
SFI1-203ENST00000400288 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
SFI1-203ENST00000400288 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
SFI1-203ENST00000400288 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
SFI1-203ENST00000400288 APLP2Q06481 763 aa17.5■□□□□ 0.39
SFI1-203ENST00000400288 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
SFI1-203ENST00000400288 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
SFI1-203ENST00000400288 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SFI1-203ENST00000400288 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
SFI1-203ENST00000400288 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
SFI1-203ENST00000400288 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
SFI1-203ENST00000400288 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
SFI1-203ENST00000400288 NEFLP07196 543 aa17.15■□□□□ 0.34
SFI1-203ENST00000400288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
SFI1-203ENST00000400288 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
SFI1-203ENST00000400288 BCANQ96GW7 911 aa17.01■□□□□ 0.31
SFI1-203ENST00000400288 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
SFI1-203ENST00000400288 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SFI1-203ENST00000400288 MIER1Q8N108 512 aa16.9■□□□□ 0.3
SFI1-203ENST00000400288 ABCC9O60706 1549 aa16.85■□□□□ 0.29
SFI1-203ENST00000400288 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.263e-7■■■□□ 16.2
SFI1-203ENST00000400288 FKBP8Q14318 412 aa16.65■□□□□ 0.26
SFI1-203ENST00000400288 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
SFI1-203ENST00000400288 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
SFI1-203ENST00000400288 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
SFI1-203ENST00000400288 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
SFI1-203ENST00000400288 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
SFI1-203ENST00000400288 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SFI1-203ENST00000400288 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
SFI1-203ENST00000400288 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
SFI1-203ENST00000400288 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
SFI1-203ENST00000400288 ANP32CO43423 234 aa16.47■□□□□ 0.23
SFI1-203ENST00000400288 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
SFI1-203ENST00000400288 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SFI1-203ENST00000400288 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
SFI1-203ENST00000400288 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
SFI1-203ENST00000400288 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
SFI1-203ENST00000400288 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
SFI1-203ENST00000400288 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
SFI1-203ENST00000400288 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
SFI1-203ENST00000400288 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
SFI1-203ENST00000400288 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
SFI1-203ENST00000400288 NBR1Q14596 966 aa16.25■□□□□ 0.19
SFI1-203ENST00000400288 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
SFI1-203ENST00000400288 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
SFI1-203ENST00000400288 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
SFI1-203ENST00000400288 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
SFI1-203ENST00000400288 CLIP1P30622 1438 aa16.2■□□□□ 0.18
SFI1-203ENST00000400288 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
SFI1-203ENST00000400288 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
SFI1-203ENST00000400288 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
SFI1-203ENST00000400288 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
SFI1-203ENST00000400288 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
SFI1-203ENST00000400288 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SFI1-203ENST00000400288 SOGA1O94964 1423 aa16.1■□□□□ 0.17
SFI1-203ENST00000400288 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
SFI1-203ENST00000400288 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
SFI1-203ENST00000400288 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
SFI1-203ENST00000400288 EEA1Q15075 1411 aa16.03■□□□□ 0.16
SFI1-203ENST00000400288 EIF5BO60841 1220 aaKnown RBP16.03■□□□□ 0.16
SFI1-203ENST00000400288 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
SFI1-203ENST00000400288 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
SFI1-203ENST00000400288 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
SFI1-203ENST00000400288 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
SFI1-203ENST00000400288 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
SFI1-203ENST00000400288 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
SFI1-203ENST00000400288 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
SFI1-203ENST00000400288 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
SFI1-203ENST00000400288 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
SFI1-203ENST00000400288 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 NACADO15069 1562 aa15.93■□□□□ 0.14
SFI1-203ENST00000400288 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
SFI1-203ENST00000400288 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
SFI1-203ENST00000400288 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
SFI1-203ENST00000400288 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
SFI1-203ENST00000400288 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
SFI1-203ENST00000400288 NOP58Q9Y2X3 529 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms