RNA–Protein interactions for RNA: ENST00000573846.1

LCAT-206, Transcript of lecithin-cholesterol acyltransferase, humanhuman

TSL 2

Gene LCAT, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCAT-206ENST00000573846 NISCHQ9Y2I1 1504 aa47.13■■■■■ 5.14
LCAT-206ENST00000573846 CCDC180Q9P1Z9 1646 aa41.92■■■■■ 4.3
LCAT-206ENST00000573846 ABCC9O60706 1549 aa41.18■■■■■ 4.18
LCAT-206ENST00000573846 DCAF8L2P0C7V8 631 aa39.62■■■■□ 3.93
LCAT-206ENST00000573846 RB1CC1Q8TDY2 1594 aa39.56■■■■□ 3.92
LCAT-206ENST00000573846 NACADO15069 1562 aa39.47■■■■□ 3.91
LCAT-206ENST00000573846 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
LCAT-206ENST00000573846 MYO15BQ96JP2 1530 aa39.17■■■■□ 3.86
LCAT-206ENST00000573846 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
LCAT-206ENST00000573846 UNC13AQ9UPW8 1703 aa38.55■■■■□ 3.76
LCAT-206ENST00000573846 PABPN1Q86U42 306 aaKnown RBP eCLIP38.51■■■■□ 3.769e-7■■■□□ 16.2
LCAT-206ENST00000573846 SCRIBQ14160 1630 aa38.29■■■■□ 3.72
LCAT-206ENST00000573846 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
LCAT-206ENST00000573846 SHROOM4Q9ULL8 1493 aa37.92■■■■□ 3.66
LCAT-206ENST00000573846 DNAJC5BQ9UF47 199 aa37.85■■■■□ 3.65
LCAT-206ENST00000573846 EIF4G1Q04637 1599 aaKnown RBP37.34■■■■□ 3.57
LCAT-206ENST00000573846 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
LCAT-206ENST00000573846 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
LCAT-206ENST00000573846 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
LCAT-206ENST00000573846 BAZ1AQ9NRL2 1556 aaPredicted RBP36.56■■■■□ 3.44
LCAT-206ENST00000573846 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
LCAT-206ENST00000573846 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
LCAT-206ENST00000573846 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
LCAT-206ENST00000573846 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
LCAT-206ENST00000573846 HMGXB3Q12766 1538 aa36.22■■■■□ 3.39
LCAT-206ENST00000573846 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
LCAT-206ENST00000573846 BAZ1BQ9UIG0 1483 aaKnown RBP36.17■■■■□ 3.38
LCAT-206ENST00000573846 WIZO95785 1651 aa35.91■■■■□ 3.34
LCAT-206ENST00000573846 RSF1Q96T23 1441 aaPredicted RBP35.88■■■■□ 3.33
LCAT-206ENST00000573846 NESP48681 1621 aa35.57■■■■□ 3.29
LCAT-206ENST00000573846 ERCC6Q03468 1493 aa35.57■■■■□ 3.28
LCAT-206ENST00000573846 TOP2AP11388 1531 aaKnown RBP35.54■■■■□ 3.28
LCAT-206ENST00000573846 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
LCAT-206ENST00000573846 CADPSQ9ULU8 1353 aa35.39■■■■□ 3.26
LCAT-206ENST00000573846 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.24
LCAT-206ENST00000573846 CUX2O14529 1486 aa35.16■■■■□ 3.22
LCAT-206ENST00000573846 CCDC88BA6NC98 1476 aa35.14■■■■□ 3.22
LCAT-206ENST00000573846 KIF21AQ7Z4S6 1674 aa35.13■■■■□ 3.21
LCAT-206ENST00000573846 CFTRP13569 1480 aa35.12■■■■□ 3.21
LCAT-206ENST00000573846 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
LCAT-206ENST00000573846 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
LCAT-206ENST00000573846 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
LCAT-206ENST00000573846 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
LCAT-206ENST00000573846 MRC2Q9UBG0 1479 aa34.91■■■■□ 3.18
LCAT-206ENST00000573846 PRDM2Q13029 1718 aa34.8■■■■□ 3.16
LCAT-206ENST00000573846 WDR62O43379 1518 aa34.76■■■■□ 3.15
LCAT-206ENST00000573846 URB2Q14146 1524 aaKnown RBP34.59■■■■□ 3.13
LCAT-206ENST00000573846 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
LCAT-206ENST00000573846 TOPBP1Q92547 1522 aa34.39■■■■□ 3.1
LCAT-206ENST00000573846 DNMBPQ6XZF7 1577 aa34.34■■■■□ 3.09
LCAT-206ENST00000573846 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
LCAT-206ENST00000573846 DNAJC5Q9H3Z4 198 aa34.22■■■■□ 3.07
LCAT-206ENST00000573846 POLA1P09884 1462 aaPredicted RBP34.08■■■■□ 3.05
LCAT-206ENST00000573846 CUX1P39880 1505 aa34.07■■■■□ 3.04
LCAT-206ENST00000573846 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
LCAT-206ENST00000573846 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.03
LCAT-206ENST00000573846 SOGA1O94964 1423 aa34■■■■□ 3.03
LCAT-206ENST00000573846 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
LCAT-206ENST00000573846 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.03
LCAT-206ENST00000573846 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.02
LCAT-206ENST00000573846 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.012e-9■■■■■ 47.9
LCAT-206ENST00000573846 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
LCAT-206ENST00000573846 TDRD9Q8NDG6 1382 aaKnown RBP33.82■■■■□ 3
LCAT-206ENST00000573846 OSCARQ8IYS5 282 aa33.78■■■■□ 3
LCAT-206ENST00000573846 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
LCAT-206ENST00000573846 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
LCAT-206ENST00000573846 WDR97A6NE52 1622 aa33.73■■■□□ 2.99
LCAT-206ENST00000573846 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
LCAT-206ENST00000573846 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
LCAT-206ENST00000573846 FBLN2P98095 1184 aa33.61■■■□□ 2.97
LCAT-206ENST00000573846 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
LCAT-206ENST00000573846 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
LCAT-206ENST00000573846 SNAPC4Q5SXM2 1469 aa33.55■■■□□ 2.96
LCAT-206ENST00000573846 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
LCAT-206ENST00000573846 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
LCAT-206ENST00000573846 CHMP7Q8WUX9 453 aaPredicted RBP33.48■■■□□ 2.95
LCAT-206ENST00000573846 CHD1O14646 1710 aa33.48■■■□□ 2.95
LCAT-206ENST00000573846 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
LCAT-206ENST00000573846 SYNJ2O15056 1496 aa33.38■■■□□ 2.93
LCAT-206ENST00000573846 ERICH3Q5RHP9 1530 aa33.27■■■□□ 2.92
LCAT-206ENST00000573846 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
LCAT-206ENST00000573846 KIF27Q86VH2 1401 aa33.2■■■□□ 2.91
LCAT-206ENST00000573846 ADAMTS12P58397 1594 aa33.2■■■□□ 2.91
LCAT-206ENST00000573846 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
LCAT-206ENST00000573846 GRIN2AQ12879 1464 aa33.14■■■□□ 2.9
LCAT-206ENST00000573846 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
LCAT-206ENST00000573846 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
LCAT-206ENST00000573846 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
LCAT-206ENST00000573846 ARHGEF11O15085 1522 aa33.12■■■□□ 2.89
LCAT-206ENST00000573846 CLASP1Q7Z460 1538 aa33.1■■■□□ 2.89
LCAT-206ENST00000573846 IGF1RP08069 1367 aa33.03■■■□□ 2.88
LCAT-206ENST00000573846 NUP160Q12769 1436 aa32.97■■■□□ 2.87
LCAT-206ENST00000573846 CEP170Q5SW79 1584 aa32.95■■■□□ 2.86
LCAT-206ENST00000573846 CUL7Q14999 1698 aa32.94■■■□□ 2.86
LCAT-206ENST00000573846 CYB5RLQ6IPT4 315 aa32.93■■■□□ 2.86
LCAT-206ENST00000573846 CARMIL1Q5VZK9 1371 aa32.88■■■□□ 2.85
LCAT-206ENST00000573846 ARAP1Q96P48 1450 aa32.84■■■□□ 2.85
LCAT-206ENST00000573846 RUSC2Q8N2Y8 1516 aa32.8■■■□□ 2.84
LCAT-206ENST00000573846 JPH4Q96JJ6 628 aa32.73■■■□□ 2.83
LCAT-206ENST00000573846 SHROOM2Q13796 1616 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms