Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 OAZ1-209ENST00000592787 857 ntTSL 218.15■□□□□ 0.52e-6■■□□□ 12.6
SFPQP23246 OAZ1-207ENST00000590943 1012 ntTSL 217.85■□□□□ 0.452e-6■■□□□ 12.6
SFPQP23246 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.433e-7■■□□□ 12.6
SFPQP23246 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC10.56□□□□□ -0.723e-7■■□□□ 12.6
SFPQP23246 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.233e-7■■□□□ 12.6
SFPQP23246 ASPSCR1-204ENST00000577733 5503 ntTSL 219.59■□□□□ 0.737e-13■■□□□ 12.6
SFPQP23246 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.512e-7■■□□□ 12.6
SFPQP23246 NRIP1-205ENST00000637630 573 ntTSL 313.65□□□□□ -0.222e-7■■□□□ 12.6
SFPQP23246 NRIP1-207ENST00000638122 543 ntTSL 1 (best)13.42□□□□□ -0.262e-7■■□□□ 12.6
SFPQP23246 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.382e-7■■□□□ 12.6
SFPQP23246 NRIP1-206ENST00000637963 498 ntTSL 411.71□□□□□ -0.532e-7■■□□□ 12.6
SFPQP23246 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.662e-7■■□□□ 12.6
SFPQP23246 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.021e-6■■□□□ 12.6
SFPQP23246 SEPT9-210ENST00000585929 906 ntTSL 416.84■□□□□ 0.291e-6■■□□□ 12.6
SFPQP23246 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.49■□□□□ 0.231e-6■■□□□ 12.6
SFPQP23246 SEPT9-213ENST00000586433 569 ntTSL 413.61□□□□□ -0.231e-6■■□□□ 12.6
SFPQP23246 SEPT9-234ENST00000590938 611 ntTSL 411.39□□□□□ -0.591e-6■■□□□ 12.6
SFPQP23246 CRIM1-204ENST00000428774 700 ntTSL 311.81□□□□□ -0.523e-8■■□□□ 12.6
SFPQP23246 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.52■■□□□ 1.043e-6■■□□□ 12.6
SFPQP23246 RAPGEF5-208ENST00000471484 589 ntTSL 411.53□□□□□ -0.563e-6■■□□□ 12.6
SFPQP23246 SORBS1-215ENST00000474353 2906 ntTSL 210.74□□□□□ -0.694e-9■■□□□ 12.6
SFPQP23246 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.794e-9■■□□□ 12.6
SFPQP23246 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.854e-9■■□□□ 12.6
SFPQP23246 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.984e-9■■□□□ 12.6
SFPQP23246 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.044e-9■■□□□ 12.6
SFPQP23246 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.063e-6■■□□□ 12.6
SFPQP23246 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.114e-9■■□□□ 12.6
SFPQP23246 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.134e-9■■□□□ 12.6
SFPQP23246 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.353e-7■■□□□ 12.6
SFPQP23246 EIF4G3-206ENST00000411888 1122 ntTSL 529.33■■■□□ 2.292e-6■■□□□ 12.6
SFPQP23246 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.46■■□□□ 1.352e-6■■□□□ 12.6
SFPQP23246 EIF4G3-208ENST00000438975 1270 ntTSL 522.53■■□□□ 1.22e-6■■□□□ 12.6
SFPQP23246 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.67■□□□□ 0.92e-6■■□□□ 12.6
SFPQP23246 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.662e-6■■□□□ 12.6
SFPQP23246 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.582e-6■■□□□ 12.6
SFPQP23246 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.242e-6■■□□□ 12.6
SFPQP23246 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC9.9□□□□□ -0.822e-6■■□□□ 12.6
SFPQP23246 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.52■■□□□ 1.362e-6■■□□□ 12.5
SFPQP23246 MATR3-221ENST00000513121 573 ntTSL 221.34■■□□□ 1.012e-6■■□□□ 12.5
SFPQP23246 MATR3-208ENST00000504045 1530 ntTSL 518.83■□□□□ 0.62e-6■■□□□ 12.5
SFPQP23246 MATR3-220ENST00000512876 575 ntTSL 318.82■□□□□ 0.62e-6■■□□□ 12.5
SFPQP23246 MATR3-222ENST00000513678 444 ntTSL 218.82■□□□□ 0.62e-6■■□□□ 12.5
SFPQP23246 MATR3-235ENST00000506147 580 ntTSL 417.37■□□□□ 0.372e-6■■□□□ 12.5
SFPQP23246 MATR3-239ENST00000514694 587 ntTSL 417.06■□□□□ 0.322e-6■■□□□ 12.5
SFPQP23246 MATR3-238ENST00000512107 579 ntTSL 415.98■□□□□ 0.152e-6■■□□□ 12.5
SFPQP23246 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC14.9□□□□□ -0.022e-6■■□□□ 12.5
SFPQP23246 MATR3-236ENST00000509644 750 ntTSL 314.52□□□□□ -0.092e-6■■□□□ 12.5
SFPQP23246 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.122e-6■■□□□ 12.5
SFPQP23246 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.152e-6■■□□□ 12.5
SFPQP23246 MATR3-234ENST00000505016 664 ntTSL 213.69□□□□□ -0.222e-6■■□□□ 12.5
SFPQP23246 MATR3-231ENST00000502394 589 ntTSL 413.23□□□□□ -0.292e-6■■□□□ 12.5
SFPQP23246 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.782e-6■■□□□ 12.5
SFPQP23246 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.922e-6■■□□□ 12.5
SFPQP23246 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.23□□□□□ -0.932e-6■■□□□ 12.5
SFPQP23246 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.65□□□□□ -1.182e-6■■□□□ 12.5
SFPQP23246 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.61□□□□□ -1.352e-6■■□□□ 12.5
SFPQP23246 MATR3-212ENST00000507860 571 ntTSL 46.51□□□□□ -1.372e-6■■□□□ 12.5
SFPQP23246 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.25□□□□□ -1.412e-6■■□□□ 12.5
SFPQP23246 MATR3-218ENST00000511978 573 ntTSL 35.8□□□□□ -1.482e-6■■□□□ 12.5
SFPQP23246 MATR3-214ENST00000509918 377 ntTSL 45.57□□□□□ -1.522e-6■■□□□ 12.5
SFPQP23246 MATR3-216ENST00000511249 447 ntTSL 45.01□□□□□ -1.612e-6■■□□□ 12.5
SFPQP23246 MATR3-209ENST00000504311 423 ntTSL 34.99□□□□□ -1.612e-6■■□□□ 12.5
SFPQP23246 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC14.33□□□□□ -0.111e-6■■□□□ 12.5
SFPQP23246 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.425e-6■■□□□ 12.5
SFPQP23246 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.316e-6■■□□□ 12.5
SFPQP23246 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.12■■□□□ 1.296e-6■■□□□ 12.5
SFPQP23246 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.296e-6■■□□□ 12.5
SFPQP23246 NCOR2-223ENST00000542565 746 ntTSL 322.73■■□□□ 1.236e-6■■□□□ 12.5
SFPQP23246 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.916e-6■■□□□ 12.5
SFPQP23246 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.826e-6■■□□□ 12.5
SFPQP23246 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.14■□□□□ 0.816e-6■■□□□ 12.5
SFPQP23246 KDM6A-207ENST00000475233 612 ntTSL 520.12■□□□□ 0.816e-6■■□□□ 12.5
SFPQP23246 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.86e-6■■□□□ 12.5
SFPQP23246 ARID4B-208ENST00000466653 2315 ntTSL 219.9■□□□□ 0.786e-6■■□□□ 12.5
SFPQP23246 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.57■□□□□ 0.726e-6■■□□□ 12.5
SFPQP23246 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.716e-6■■□□□ 12.5
SFPQP23246 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.51■□□□□ 0.716e-6■■□□□ 12.5
SFPQP23246 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.44■□□□□ 0.76e-6■■□□□ 12.5
SFPQP23246 ARID4B-204ENST00000418304 1759 ntTSL 519.06■□□□□ 0.646e-6■■□□□ 12.5
SFPQP23246 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.51■□□□□ 0.556e-6■■□□□ 12.5
SFPQP23246 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.71■□□□□ 0.436e-6■■□□□ 12.5
SFPQP23246 EIPR1-209ENST00000462515 577 ntTSL 317.44■□□□□ 0.386e-6■■□□□ 12.5
SFPQP23246 CMSS1-202ENST00000463526 397 ntTSL 317.2■□□□□ 0.346e-6■■□□□ 12.5
SFPQP23246 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.75■□□□□ 0.276e-6■■□□□ 12.5
SFPQP23246 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.69■□□□□ 0.266e-6■■□□□ 12.5
SFPQP23246 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.246e-6■■□□□ 12.5
SFPQP23246 BCR-207ENST00000463770 168 ntTSL 1 (best)16.27■□□□□ 0.26e-6■■□□□ 12.5
SFPQP23246 FOXN2-202ENST00000413569 932 ntTSL 315.54■□□□□ 0.086e-6■■□□□ 12.5
SFPQP23246 BCR-212ENST00000479188 658 ntTSL 415.25■□□□□ 0.036e-6■■□□□ 12.5
SFPQP23246 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC14.39□□□□□ -0.116e-6■■□□□ 12.5
SFPQP23246 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.136e-6■■□□□ 12.5
SFPQP23246 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC14.05□□□□□ -0.166e-6■■□□□ 12.5
SFPQP23246 TULP4-206ENST00000616856 2307 ntTSL 214.01□□□□□ -0.176e-6■■□□□ 12.5
SFPQP23246 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)13.9□□□□□ -0.186e-6■■□□□ 12.5
SFPQP23246 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC13.88□□□□□ -0.196e-6■■□□□ 12.5
SFPQP23246 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.196e-6■■□□□ 12.5
SFPQP23246 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.64□□□□□ -0.236e-6■■□□□ 12.5
SFPQP23246 EIPR1-213ENST00000482570 582 ntTSL 213.49□□□□□ -0.256e-6■■□□□ 12.5
SFPQP23246 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC13.42□□□□□ -0.266e-6■■□□□ 12.5
SFPQP23246 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)13.29□□□□□ -0.286e-6■■□□□ 12.5
Retrieved 100 of 4,991 protein–RNA pairs in 96.5 ms