RNA–Protein interactions for RNA: ENST00000377967.8

KDM6A-201, Transcript of lysine demethylase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM6A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-201ENST00000377967 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
KDM6A-201ENST00000377967 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
KDM6A-201ENST00000377967 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
KDM6A-201ENST00000377967 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
KDM6A-201ENST00000377967 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
KDM6A-201ENST00000377967 APLP2Q06481 763 aa19.51■□□□□ 0.71
KDM6A-201ENST00000377967 EHMT2Q96KQ7 1210 aa19.49■□□□□ 0.71
KDM6A-201ENST00000377967 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
KDM6A-201ENST00000377967 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
KDM6A-201ENST00000377967 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
KDM6A-201ENST00000377967 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
KDM6A-201ENST00000377967 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
KDM6A-201ENST00000377967 ABCC9O60706 1549 aa18.65■□□□□ 0.58
KDM6A-201ENST00000377967 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
KDM6A-201ENST00000377967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
KDM6A-201ENST00000377967 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
KDM6A-201ENST00000377967 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
KDM6A-201ENST00000377967 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
KDM6A-201ENST00000377967 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
KDM6A-201ENST00000377967 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
KDM6A-201ENST00000377967 FBLN2P98095 1184 aa18.08■□□□□ 0.48
KDM6A-201ENST00000377967 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
KDM6A-201ENST00000377967 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
KDM6A-201ENST00000377967 ITGAEP38570 1179 aa18■□□□□ 0.47
KDM6A-201ENST00000377967 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
KDM6A-201ENST00000377967 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
KDM6A-201ENST00000377967 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
KDM6A-201ENST00000377967 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
KDM6A-201ENST00000377967 NPM1P06748 294 aaKnown RBP eCLIP17.69■□□□□ 0.42
KDM6A-201ENST00000377967 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
KDM6A-201ENST00000377967 NEFLP07196 543 aa17.65■□□□□ 0.42
KDM6A-201ENST00000377967 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
KDM6A-201ENST00000377967 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
KDM6A-201ENST00000377967 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
KDM6A-201ENST00000377967 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
KDM6A-201ENST00000377967 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
KDM6A-201ENST00000377967 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
KDM6A-201ENST00000377967 BCANQ96GW7 911 aa17.54■□□□□ 0.4
KDM6A-201ENST00000377967 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
KDM6A-201ENST00000377967 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
KDM6A-201ENST00000377967 P3H3Q8IVL6 736 aa17.44■□□□□ 0.38
KDM6A-201ENST00000377967 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
KDM6A-201ENST00000377967 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
KDM6A-201ENST00000377967 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
KDM6A-201ENST00000377967 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
KDM6A-201ENST00000377967 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
KDM6A-201ENST00000377967 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
KDM6A-201ENST00000377967 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
KDM6A-201ENST00000377967 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
KDM6A-201ENST00000377967 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
KDM6A-201ENST00000377967 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
KDM6A-201ENST00000377967 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
KDM6A-201ENST00000377967 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
KDM6A-201ENST00000377967 NEFMP07197 916 aa17.18■□□□□ 0.34
KDM6A-201ENST00000377967 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
KDM6A-201ENST00000377967 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
KDM6A-201ENST00000377967 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
KDM6A-201ENST00000377967 NACADO15069 1562 aa17.12■□□□□ 0.33
KDM6A-201ENST00000377967 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
KDM6A-201ENST00000377967 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
KDM6A-201ENST00000377967 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
KDM6A-201ENST00000377967 HRCP23327 699 aa17.02■□□□□ 0.32
KDM6A-201ENST00000377967 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
KDM6A-201ENST00000377967 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
KDM6A-201ENST00000377967 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
KDM6A-201ENST00000377967 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
KDM6A-201ENST00000377967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
KDM6A-201ENST00000377967 PLEKHD1A6NEE1 506 aa16.96■□□□□ 0.31
KDM6A-201ENST00000377967 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
KDM6A-201ENST00000377967 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
KDM6A-201ENST00000377967 ANP32CO43423 234 aa16.9■□□□□ 0.3
KDM6A-201ENST00000377967 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
KDM6A-201ENST00000377967 PPP1R15AO75807 674 aaPredicted RBP16.85■□□□□ 0.29
KDM6A-201ENST00000377967 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.29
KDM6A-201ENST00000377967 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
KDM6A-201ENST00000377967 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
KDM6A-201ENST00000377967 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
KDM6A-201ENST00000377967 TONSLQ96HA7 1378 aa16.76■□□□□ 0.27
KDM6A-201ENST00000377967 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
KDM6A-201ENST00000377967 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
KDM6A-201ENST00000377967 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
KDM6A-201ENST00000377967 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
KDM6A-201ENST00000377967 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
KDM6A-201ENST00000377967 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
KDM6A-201ENST00000377967 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
KDM6A-201ENST00000377967 ACIN1Q9UKV3 1341 aaKnown RBP16.68■□□□□ 0.26
KDM6A-201ENST00000377967 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
KDM6A-201ENST00000377967 A0A0G2JS52 829 aa16.67■□□□□ 0.26
KDM6A-201ENST00000377967 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
KDM6A-201ENST00000377967 EEA1Q15075 1411 aa16.66■□□□□ 0.26
KDM6A-201ENST00000377967 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
KDM6A-201ENST00000377967 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
KDM6A-201ENST00000377967 KDM2AQ9Y2K7 1162 aa16.63■□□□□ 0.25
KDM6A-201ENST00000377967 CLIP1P30622 1438 aa16.63■□□□□ 0.25
KDM6A-201ENST00000377967 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
KDM6A-201ENST00000377967 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
KDM6A-201ENST00000377967 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
KDM6A-201ENST00000377967 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
KDM6A-201ENST00000377967 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
KDM6A-201ENST00000377967 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms