RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
TULP4-206ENST00000616856 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
TULP4-206ENST00000616856 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
TULP4-206ENST00000616856 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
TULP4-206ENST00000616856 ABCC9O60706 1549 aa22.55■■□□□ 1.2
TULP4-206ENST00000616856 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
TULP4-206ENST00000616856 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
TULP4-206ENST00000616856 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
TULP4-206ENST00000616856 NACADO15069 1562 aa22.06■■□□□ 1.12
TULP4-206ENST00000616856 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
TULP4-206ENST00000616856 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
TULP4-206ENST00000616856 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
TULP4-206ENST00000616856 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
TULP4-206ENST00000616856 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
TULP4-206ENST00000616856 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
TULP4-206ENST00000616856 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
TULP4-206ENST00000616856 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
TULP4-206ENST00000616856 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
TULP4-206ENST00000616856 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
TULP4-206ENST00000616856 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
TULP4-206ENST00000616856 WIZO95785 1651 aa20.86■□□□□ 0.93
TULP4-206ENST00000616856 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
TULP4-206ENST00000616856 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
TULP4-206ENST00000616856 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
TULP4-206ENST00000616856 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
TULP4-206ENST00000616856 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
TULP4-206ENST00000616856 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
TULP4-206ENST00000616856 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
TULP4-206ENST00000616856 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
TULP4-206ENST00000616856 CC2D2AQ9P2K1 1620 aa20.37■□□□□ 0.85
TULP4-206ENST00000616856 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
TULP4-206ENST00000616856 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
TULP4-206ENST00000616856 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
TULP4-206ENST00000616856 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
TULP4-206ENST00000616856 ABCC8Q09428 1581 aa20.02■□□□□ 0.79
TULP4-206ENST00000616856 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
TULP4-206ENST00000616856 CFTRP13569 1480 aa19.92■□□□□ 0.78
TULP4-206ENST00000616856 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
TULP4-206ENST00000616856 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
TULP4-206ENST00000616856 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
TULP4-206ENST00000616856 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
TULP4-206ENST00000616856 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
TULP4-206ENST00000616856 NESP48681 1621 aa19.78■□□□□ 0.76
TULP4-206ENST00000616856 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
TULP4-206ENST00000616856 HRCP23327 699 aa19.74■□□□□ 0.75
TULP4-206ENST00000616856 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
TULP4-206ENST00000616856 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
TULP4-206ENST00000616856 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
TULP4-206ENST00000616856 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
TULP4-206ENST00000616856 CUX1P39880 1505 aa19.65■□□□□ 0.74
TULP4-206ENST00000616856 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
TULP4-206ENST00000616856 SOGA1O94964 1423 aa19.62■□□□□ 0.73
TULP4-206ENST00000616856 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
TULP4-206ENST00000616856 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
TULP4-206ENST00000616856 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
TULP4-206ENST00000616856 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
TULP4-206ENST00000616856 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
TULP4-206ENST00000616856 EEA1Q15075 1411 aa19.47■□□□□ 0.71
TULP4-206ENST00000616856 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
TULP4-206ENST00000616856 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
TULP4-206ENST00000616856 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
TULP4-206ENST00000616856 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
TULP4-206ENST00000616856 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
TULP4-206ENST00000616856 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
TULP4-206ENST00000616856 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
TULP4-206ENST00000616856 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
TULP4-206ENST00000616856 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
TULP4-206ENST00000616856 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
TULP4-206ENST00000616856 CUX2O14529 1486 aa19.33■□□□□ 0.69
TULP4-206ENST00000616856 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
TULP4-206ENST00000616856 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
TULP4-206ENST00000616856 KIF21BO75037 1637 aa19.25■□□□□ 0.67
TULP4-206ENST00000616856 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
TULP4-206ENST00000616856 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
TULP4-206ENST00000616856 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
TULP4-206ENST00000616856 WDR62O43379 1518 aa19.21■□□□□ 0.67
TULP4-206ENST00000616856 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
TULP4-206ENST00000616856 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
TULP4-206ENST00000616856 IGF1RP08069 1367 aa19.18■□□□□ 0.66
TULP4-206ENST00000616856 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
TULP4-206ENST00000616856 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
TULP4-206ENST00000616856 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
TULP4-206ENST00000616856 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
TULP4-206ENST00000616856 ZEB1P37275 1124 aaPredicted RBP19.14■□□□□ 0.65
TULP4-206ENST00000616856 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
TULP4-206ENST00000616856 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
TULP4-206ENST00000616856 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
TULP4-206ENST00000616856 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.65
TULP4-206ENST00000616856 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.65
TULP4-206ENST00000616856 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
TULP4-206ENST00000616856 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.646e-6■■■■□ 25.1
TULP4-206ENST00000616856 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
TULP4-206ENST00000616856 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.64
TULP4-206ENST00000616856 CUL7Q14999 1698 aa19.01■□□□□ 0.63
TULP4-206ENST00000616856 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
TULP4-206ENST00000616856 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
TULP4-206ENST00000616856 CLIP1P30622 1438 aa18.96■□□□□ 0.63
TULP4-206ENST00000616856 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
TULP4-206ENST00000616856 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
TULP4-206ENST00000616856 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms