Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 DEAF1-203ENST00000525626 585 ntTSL 315.52■□□□□ 0.087e-8■■■□□ 15
NKRFO15226 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■■■□□ 15
NKRFO15226 PQLC1-205ENST00000469369 593 ntTSL 415.73■□□□□ 0.112e-6■■■□□ 15
NKRFO15226 SEPT9-235ENST00000591020 582 ntTSL 412.67□□□□□ -0.387e-7■■■□□ 15
NKRFO15226 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.621e-6■■■□□ 15
NKRFO15226 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 323■■□□□ 1.271e-6■■■□□ 15
NKRFO15226 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.151e-6■■■□□ 15
NKRFO15226 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.991e-6■■■□□ 15
NKRFO15226 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.271e-9■■■□□ 15
NKRFO15226 RORA-206ENST00000557822 545 ntTSL 418.22■□□□□ 0.511e-9■■■□□ 15
NKRFO15226 RORA-210ENST00000559343 577 ntTSL 414.51□□□□□ -0.091e-9■■■□□ 15
NKRFO15226 RORA-207ENST00000558234 3910 ntTSL 1 (best)12.96□□□□□ -0.341e-9■■■□□ 15
NKRFO15226 RORA-212ENST00000560004 544 ntTSL 412.91□□□□□ -0.341e-9■■■□□ 15
NKRFO15226 RORA-205ENST00000551975 749 ntTSL 311.63□□□□□ -0.551e-9■■■□□ 15
NKRFO15226 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.11□□□□□ -1.111e-9■■■□□ 15
NKRFO15226 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.75□□□□□ -1.171e-9■■■□□ 15
NKRFO15226 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.331e-9■■■□□ 15
NKRFO15226 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.478e-7■■■□□ 15
NKRFO15226 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.83■□□□□ 0.938e-7■■■□□ 15
NKRFO15226 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.71■□□□□ 0.758e-7■■■□□ 15
NKRFO15226 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.68■□□□□ 0.748e-7■■■□□ 15
NKRFO15226 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.12e-7■■■□□ 15
NKRFO15226 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.112e-7■■■□□ 15
NKRFO15226 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.173e-6■■■□□ 14.9
NKRFO15226 FASN-210ENST00000636968 100 ntTSL 519.45■□□□□ 0.79e-31■■■□□ 14.9
NKRFO15226 FASN-211ENST00000637026 100 ntTSL 512.2□□□□□ -0.469e-31■■■□□ 14.9
NKRFO15226 FASN-213ENST00000637693 100 ntTSL 510.72□□□□□ -0.699e-31■■■□□ 14.9
NKRFO15226 SRC-206ENST00000472968 461 ntTSL 319.74■□□□□ 0.757e-7■■■□□ 14.9
NKRFO15226 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.11■■□□□ 1.771e-7■■■□□ 14.9
NKRFO15226 RAP1GAP-202ENST00000317967 600 ntTSL 218.04■□□□□ 0.489e-7■■■□□ 14.9
NKRFO15226 RAP1GAP-213ENST00000611549 4294 ntTSL 513.97□□□□□ -0.179e-7■■■□□ 14.9
NKRFO15226 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC13.81□□□□□ -0.29e-7■■■□□ 14.9
NKRFO15226 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.319e-7■■■□□ 14.9
NKRFO15226 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.69e-7■■■□□ 14.9
NKRFO15226 BCAR1-213ENST00000563323 558 ntTSL 323.81■■□□□ 1.43e-7■■■□□ 14.9
NKRFO15226 INHA-202ENST00000489456 645 ntTSL 216.28■□□□□ 0.22e-6■■■□□ 14.9
NKRFO15226 PAK4-204ENST00000593480 714 ntTSL 323.1■■□□□ 1.293e-6■■■□□ 14.9
NKRFO15226 PAK4-212ENST00000602004 564 ntTSL 421.74■■□□□ 1.073e-6■■■□□ 14.9
NKRFO15226 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.12■□□□□ 0.813e-6■■■□□ 14.9
NKRFO15226 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.97■□□□□ 0.793e-6■■■□□ 14.9
NKRFO15226 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.693e-6■■■□□ 14.9
NKRFO15226 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.363e-6■■■□□ 14.9
NKRFO15226 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.84■□□□□ 0.133e-6■■■□□ 14.9
NKRFO15226 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC10.61□□□□□ -0.717e-8■■■□□ 14.9
NKRFO15226 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.057e-8■■■□□ 14.9
NKRFO15226 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.586e-6■■■□□ 14.9
NKRFO15226 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.13■□□□□ 0.973e-6■■■□□ 14.9
NKRFO15226 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.833e-6■■■□□ 14.9
NKRFO15226 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.873e-6■■■□□ 14.9
NKRFO15226 RNF126-207ENST00000605891 1671 ntTSL 535.28■■■■□ 3.244e-9■■■□□ 14.9
NKRFO15226 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.824e-9■■■□□ 14.9
NKRFO15226 RNF126-203ENST00000589762 963 ntTSL 229.98■■■□□ 2.394e-9■■■□□ 14.9
NKRFO15226 RNF126-205ENST00000591394 733 ntTSL 225.98■■□□□ 1.754e-9■■■□□ 14.9
NKRFO15226 RNF126-206ENST00000592626 652 ntTSL 221.93■■□□□ 1.14e-9■■■□□ 14.9
NKRFO15226 RNF126-204ENST00000590885 1436 ntTSL 521.18■□□□□ 0.984e-9■■■□□ 14.9
NKRFO15226 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.871e-6■■■□□ 14.9
NKRFO15226 MIDN-203ENST00000586843 416 ntTSL 224.2■■□□□ 1.462e-7■■■□□ 14.9
NKRFO15226 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.412e-6■■■□□ 14.9
NKRFO15226 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.097e-7■■■□□ 14.9
NKRFO15226 SOD1-203ENST00000470944 1746 ntTSL 232.48■■■□□ 2.797e-7■■■□□ 14.9
NKRFO15226 PERM1-203ENST00000479361 1208 ntTSL 1 (best)28.58■■■□□ 2.177e-7■■■□□ 14.9
NKRFO15226 FAM216A-205ENST00000548449 929 ntTSL 1 (best)26.56■■□□□ 1.847e-7■■■□□ 14.9
NKRFO15226 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.827e-7■■■□□ 14.9
NKRFO15226 CFL1-205ENST00000526975 567 ntTSL 321.88■■□□□ 1.098e-10■■■□□ 14.9
NKRFO15226 FAM216A-202ENST00000538285 1679 ntTSL 1 (best)21.82■■□□□ 1.087e-7■■■□□ 14.9
NKRFO15226 NELFA-210ENST00000455762 1022 ntTSL 521.75■■□□□ 1.077e-7■■■□□ 14.9
NKRFO15226 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.057e-7■■■□□ 14.9
NKRFO15226 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.058e-10■■■□□ 14.9
NKRFO15226 NELFA-205ENST00000416258 2188 ntTSL 520.7■□□□□ 0.97e-7■■■□□ 14.9
NKRFO15226 NELFA-201ENST00000333877 2228 ntTSL 220.58■□□□□ 0.887e-7■■■□□ 14.9
NKRFO15226 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.657e-7■■■□□ 14.9
NKRFO15226 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.648e-10■■■□□ 14.9
NKRFO15226 NELFA-212ENST00000463820 2495 ntTSL 218.86■□□□□ 0.617e-7■■■□□ 14.9
NKRFO15226 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.71■□□□□ 0.598e-10■■■□□ 14.9
NKRFO15226 CFL1-210ENST00000530945 1509 ntTSL 218.7■□□□□ 0.588e-10■■■□□ 14.9
NKRFO15226 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.577e-7■■■□□ 14.9
NKRFO15226 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.457e-7■■■□□ 14.9
NKRFO15226 NELFA-207ENST00000431323 888 ntTSL 517.83■□□□□ 0.447e-7■■■□□ 14.9
NKRFO15226 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.447e-7■■■□□ 14.9
NKRFO15226 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.337e-7■■■□□ 14.9
NKRFO15226 NELFA-206ENST00000421397 574 ntTSL 517.11■□□□□ 0.337e-7■■■□□ 14.9
NKRFO15226 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.52■□□□□ 0.248e-10■■■□□ 14.9
NKRFO15226 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.44■□□□□ 0.227e-7■■■□□ 14.9
NKRFO15226 NELFA-208ENST00000443203 553 ntTSL 415.98■□□□□ 0.157e-7■■■□□ 14.9
NKRFO15226 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.137e-7■■■□□ 14.9
NKRFO15226 SOD1-204ENST00000476106 586 ntTSL 515.62■□□□□ 0.097e-7■■■□□ 14.9
NKRFO15226 CFL1-213ENST00000532134 855 ntTSL 515.1■□□□□ 0.018e-10■■■□□ 14.9
NKRFO15226 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.087e-7■■■□□ 14.9
NKRFO15226 SOD1-202ENST00000389995 865 ntTSL 3 BASIC13.93□□□□□ -0.187e-7■■■□□ 14.9
NKRFO15226 NELFA-204ENST00000411649 561 ntTSL 413.68□□□□□ -0.227e-7■■■□□ 14.9
NKRFO15226 CFL1-207ENST00000527752 766 ntTSL 513.67□□□□□ -0.228e-10■■■□□ 14.9
NKRFO15226 KCNIP2-209ENST00000434163 534 ntTSL 1 (best)11.14□□□□□ -0.637e-7■■■□□ 14.9
NKRFO15226 PLXNB1-212ENST00000473683 284 ntTSL 310.85□□□□□ -0.677e-7■■■□□ 14.9
NKRFO15226 FAM216A-206ENST00000548869 1160 ntTSL 28.18□□□□□ -1.17e-7■■■□□ 14.9
NKRFO15226 MIR3176-201ENST00000582210 90 ntBASIC6.74□□□□□ -1.337e-7■■■□□ 14.9
NKRFO15226 MTA1-210ENST00000481012 987 ntTSL 519.62■□□□□ 0.737e-7■■■□□ 14.9
NKRFO15226 MTA1-204ENST00000424723 904 ntTSL 1 (best)17.92■□□□□ 0.467e-7■■■□□ 14.9
NKRFO15226 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.07■□□□□ 0.643e-10■■■□□ 14.8
NKRFO15226 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.846e-7■■■□□ 14.8
NKRFO15226 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.226e-7■■■□□ 14.8
Retrieved 100 of 9,198 protein–RNA pairs in 109.6 ms