RNA–Protein interactions for RNA: ENST00000424723.5

MTA1-204, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-204ENST00000424723 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
MTA1-204ENST00000424723 ABCC9O60706 1549 aa34.22■■■■□ 3.07
MTA1-204ENST00000424723 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
MTA1-204ENST00000424723 RB1CC1Q8TDY2 1594 aa32.55■■■□□ 2.8
MTA1-204ENST00000424723 NACADO15069 1562 aa32.39■■■□□ 2.78
MTA1-204ENST00000424723 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
MTA1-204ENST00000424723 DNAJC5BQ9UF47 199 aa32.19■■■□□ 2.74
MTA1-204ENST00000424723 MYO15BQ96JP2 1530 aa32.01■■■□□ 2.72
MTA1-204ENST00000424723 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
MTA1-204ENST00000424723 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
MTA1-204ENST00000424723 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
MTA1-204ENST00000424723 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
MTA1-204ENST00000424723 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
MTA1-204ENST00000424723 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
MTA1-204ENST00000424723 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
MTA1-204ENST00000424723 CC2D2AQ9P2K1 1620 aa30.87■■■□□ 2.53
MTA1-204ENST00000424723 EIF4G1Q04637 1599 aaKnown RBP30.84■■■□□ 2.53
MTA1-204ENST00000424723 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
MTA1-204ENST00000424723 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
MTA1-204ENST00000424723 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
MTA1-204ENST00000424723 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
MTA1-204ENST00000424723 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
MTA1-204ENST00000424723 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
MTA1-204ENST00000424723 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
MTA1-204ENST00000424723 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
MTA1-204ENST00000424723 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
MTA1-204ENST00000424723 ERCC6Q03468 1493 aa29.51■■■□□ 2.31
MTA1-204ENST00000424723 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
MTA1-204ENST00000424723 DNAJC5Q9H3Z4 198 aa29.48■■■□□ 2.31
MTA1-204ENST00000424723 CUX2O14529 1486 aa29.46■■■□□ 2.31
MTA1-204ENST00000424723 NESP48681 1621 aa29.43■■■□□ 2.3
MTA1-204ENST00000424723 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
MTA1-204ENST00000424723 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
MTA1-204ENST00000424723 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
MTA1-204ENST00000424723 WIZO95785 1651 aa29.07■■■□□ 2.24
MTA1-204ENST00000424723 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
MTA1-204ENST00000424723 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
MTA1-204ENST00000424723 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
MTA1-204ENST00000424723 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
MTA1-204ENST00000424723 CFTRP13569 1480 aa28.74■■■□□ 2.19
MTA1-204ENST00000424723 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
MTA1-204ENST00000424723 WDR62O43379 1518 aa28.7■■■□□ 2.19
MTA1-204ENST00000424723 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
MTA1-204ENST00000424723 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
MTA1-204ENST00000424723 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
MTA1-204ENST00000424723 URB2Q14146 1524 aaKnown RBP28.45■■■□□ 2.15
MTA1-204ENST00000424723 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
MTA1-204ENST00000424723 PRDM2Q13029 1718 aa28.19■■■□□ 2.1
MTA1-204ENST00000424723 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
MTA1-204ENST00000424723 TRIM41Q8WV44 630 aa28.14■■■□□ 2.1
MTA1-204ENST00000424723 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
MTA1-204ENST00000424723 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
MTA1-204ENST00000424723 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
MTA1-204ENST00000424723 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
MTA1-204ENST00000424723 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.051e-7■■■■■ 27.5
MTA1-204ENST00000424723 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
MTA1-204ENST00000424723 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
MTA1-204ENST00000424723 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
MTA1-204ENST00000424723 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
MTA1-204ENST00000424723 SOGA1O94964 1423 aa27.79■■■□□ 2.04
MTA1-204ENST00000424723 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
MTA1-204ENST00000424723 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
MTA1-204ENST00000424723 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
MTA1-204ENST00000424723 CUX1P39880 1505 aa27.69■■■□□ 2.02
MTA1-204ENST00000424723 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
MTA1-204ENST00000424723 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
MTA1-204ENST00000424723 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
MTA1-204ENST00000424723 FBLN2P98095 1184 aa27.68■■■□□ 2.02
MTA1-204ENST00000424723 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
MTA1-204ENST00000424723 CHD1O14646 1710 aa27.55■■■□□ 2
MTA1-204ENST00000424723 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
MTA1-204ENST00000424723 WDR97A6NE52 1622 aa27.54■■■□□ 2
MTA1-204ENST00000424723 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
MTA1-204ENST00000424723 CHMP7Q8WUX9 453 aaPredicted RBP27.51■■□□□ 1.99
MTA1-204ENST00000424723 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
MTA1-204ENST00000424723 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
MTA1-204ENST00000424723 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
MTA1-204ENST00000424723 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
MTA1-204ENST00000424723 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
MTA1-204ENST00000424723 SYNJ2O15056 1496 aa27.4■■□□□ 1.98
MTA1-204ENST00000424723 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
MTA1-204ENST00000424723 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.979e-6■■■■■ 50.1
MTA1-204ENST00000424723 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
MTA1-204ENST00000424723 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
MTA1-204ENST00000424723 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
MTA1-204ENST00000424723 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
MTA1-204ENST00000424723 TRHP20396 242 aaPredicted RBP27.18■■□□□ 1.94
MTA1-204ENST00000424723 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
MTA1-204ENST00000424723 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
MTA1-204ENST00000424723 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
MTA1-204ENST00000424723 NUP160Q12769 1436 aa27.08■■□□□ 1.93
MTA1-204ENST00000424723 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
MTA1-204ENST00000424723 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
MTA1-204ENST00000424723 CEP170Q5SW79 1584 aa27.01■■□□□ 1.91
MTA1-204ENST00000424723 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
MTA1-204ENST00000424723 JPH4Q96JJ6 628 aa26.87■■□□□ 1.89
MTA1-204ENST00000424723 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
MTA1-204ENST00000424723 IGF1RP08069 1367 aa26.84■■□□□ 1.89
MTA1-204ENST00000424723 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
MTA1-204ENST00000424723 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms