RNA–Protein interactions for RNA: ENST00000611549.4

RAP1GAP-213, Transcript of RAP1 GTPase activating protein, humanhuman

TSL 5

Gene RAP1GAP, Length 4,294 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-213ENST00000611549 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
RAP1GAP-213ENST00000611549 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
RAP1GAP-213ENST00000611549 SUPT5HO00267 1087 aaKnown RBP22.84■■□□□ 1.25
RAP1GAP-213ENST00000611549 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
RAP1GAP-213ENST00000611549 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
RAP1GAP-213ENST00000611549 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
RAP1GAP-213ENST00000611549 PCGF6Q9BYE7 350 aa21.18■□□□□ 0.98
RAP1GAP-213ENST00000611549 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
RAP1GAP-213ENST00000611549 APLP2Q06481 763 aa21.03■□□□□ 0.96
RAP1GAP-213ENST00000611549 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
RAP1GAP-213ENST00000611549 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
RAP1GAP-213ENST00000611549 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
RAP1GAP-213ENST00000611549 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
RAP1GAP-213ENST00000611549 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
RAP1GAP-213ENST00000611549 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
RAP1GAP-213ENST00000611549 ABCC9O60706 1549 aa20.55■□□□□ 0.88
RAP1GAP-213ENST00000611549 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
RAP1GAP-213ENST00000611549 PPARGC1BQ86YN6 1023 aaKnown RBP20.5■□□□□ 0.87
RAP1GAP-213ENST00000611549 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
RAP1GAP-213ENST00000611549 ATP1B4Q9UN42 357 aaPredicted RBP20.4■□□□□ 0.86
RAP1GAP-213ENST00000611549 HRCP23327 699 aa20.28■□□□□ 0.84
RAP1GAP-213ENST00000611549 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
RAP1GAP-213ENST00000611549 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
RAP1GAP-213ENST00000611549 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
RAP1GAP-213ENST00000611549 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
RAP1GAP-213ENST00000611549 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
RAP1GAP-213ENST00000611549 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
RAP1GAP-213ENST00000611549 ITGAEP38570 1179 aa19.93■□□□□ 0.78
RAP1GAP-213ENST00000611549 SCRIBQ14160 1630 aa19.86■□□□□ 0.77
RAP1GAP-213ENST00000611549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
RAP1GAP-213ENST00000611549 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.76
RAP1GAP-213ENST00000611549 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
RAP1GAP-213ENST00000611549 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
RAP1GAP-213ENST00000611549 FAM50AQ14320 339 aaKnown RBP19.5■□□□□ 0.71
RAP1GAP-213ENST00000611549 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
RAP1GAP-213ENST00000611549 NEFLP07196 543 aa19.49■□□□□ 0.71
RAP1GAP-213ENST00000611549 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
RAP1GAP-213ENST00000611549 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
RAP1GAP-213ENST00000611549 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
RAP1GAP-213ENST00000611549 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
RAP1GAP-213ENST00000611549 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
RAP1GAP-213ENST00000611549 NACADO15069 1562 aa19.34■□□□□ 0.69
RAP1GAP-213ENST00000611549 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.69
RAP1GAP-213ENST00000611549 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
RAP1GAP-213ENST00000611549 TRIM52Q96A61 297 aa19.25■□□□□ 0.67
RAP1GAP-213ENST00000611549 ERICH6Q7L0X2 663 aa19.24■□□□□ 0.67
RAP1GAP-213ENST00000611549 FBLN2P98095 1184 aa19.22■□□□□ 0.67
RAP1GAP-213ENST00000611549 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
RAP1GAP-213ENST00000611549 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
RAP1GAP-213ENST00000611549 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
RAP1GAP-213ENST00000611549 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
RAP1GAP-213ENST00000611549 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
RAP1GAP-213ENST00000611549 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
RAP1GAP-213ENST00000611549 EEA1Q15075 1411 aa19.01■□□□□ 0.63
RAP1GAP-213ENST00000611549 CLIP1P30622 1438 aa19■□□□□ 0.63
RAP1GAP-213ENST00000611549 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
RAP1GAP-213ENST00000611549 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
RAP1GAP-213ENST00000611549 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
RAP1GAP-213ENST00000611549 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
RAP1GAP-213ENST00000611549 ANP32CO43423 234 aa18.93■□□□□ 0.62
RAP1GAP-213ENST00000611549 CDK11AQ9UQ88 783 aaPredicted RBP18.91■□□□□ 0.62
RAP1GAP-213ENST00000611549 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
RAP1GAP-213ENST00000611549 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
RAP1GAP-213ENST00000611549 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
RAP1GAP-213ENST00000611549 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
RAP1GAP-213ENST00000611549 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
RAP1GAP-213ENST00000611549 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
RAP1GAP-213ENST00000611549 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
RAP1GAP-213ENST00000611549 SOGA1O94964 1423 aa18.76■□□□□ 0.59
RAP1GAP-213ENST00000611549 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
RAP1GAP-213ENST00000611549 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
RAP1GAP-213ENST00000611549 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
RAP1GAP-213ENST00000611549 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
RAP1GAP-213ENST00000611549 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
RAP1GAP-213ENST00000611549 BCANQ96GW7 911 aa18.74■□□□□ 0.59
RAP1GAP-213ENST00000611549 MYT1Q01538 1121 aa18.71■□□□□ 0.59
RAP1GAP-213ENST00000611549 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
RAP1GAP-213ENST00000611549 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
RAP1GAP-213ENST00000611549 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
RAP1GAP-213ENST00000611549 WIZO95785 1651 aa18.61■□□□□ 0.57
RAP1GAP-213ENST00000611549 DAXXQ9UER7 740 aaPredicted RBP18.61■□□□□ 0.57
RAP1GAP-213ENST00000611549 MIER1Q8N108 512 aa18.57■□□□□ 0.56
RAP1GAP-213ENST00000611549 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
RAP1GAP-213ENST00000611549 TSPY4P0CV99 314 aa18.54■□□□□ 0.56
RAP1GAP-213ENST00000611549 TSPY10P0CW01 314 aa18.54■□□□□ 0.56
RAP1GAP-213ENST00000611549 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.55
RAP1GAP-213ENST00000611549 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
RAP1GAP-213ENST00000611549 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
RAP1GAP-213ENST00000611549 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
RAP1GAP-213ENST00000611549 CUX2O14529 1486 aa18.5■□□□□ 0.55
RAP1GAP-213ENST00000611549 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.55
RAP1GAP-213ENST00000611549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.546e-6■■■□□ 19.2
RAP1GAP-213ENST00000611549 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
RAP1GAP-213ENST00000611549 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
RAP1GAP-213ENST00000611549 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
RAP1GAP-213ENST00000611549 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
RAP1GAP-213ENST00000611549 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
RAP1GAP-213ENST00000611549 FKBP8Q14318 412 aa18.4■□□□□ 0.54
RAP1GAP-213ENST00000611549 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.54
RAP1GAP-213ENST00000611549 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms