RNA–Protein interactions for RNA: ENST00000473683.1

PLXNB1-212, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 284 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-212ENST00000473683 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
PLXNB1-212ENST00000473683 ABCC9O60706 1549 aa20.88■□□□□ 0.93
PLXNB1-212ENST00000473683 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
PLXNB1-212ENST00000473683 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
PLXNB1-212ENST00000473683 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
PLXNB1-212ENST00000473683 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
PLXNB1-212ENST00000473683 NACADO15069 1562 aa19.66■□□□□ 0.74
PLXNB1-212ENST00000473683 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
PLXNB1-212ENST00000473683 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
PLXNB1-212ENST00000473683 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
PLXNB1-212ENST00000473683 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
PLXNB1-212ENST00000473683 ZCCHC6Q5VYS8 1495 aaKnown RBP19.12■□□□□ 0.65
PLXNB1-212ENST00000473683 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
PLXNB1-212ENST00000473683 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
PLXNB1-212ENST00000473683 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
PLXNB1-212ENST00000473683 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
PLXNB1-212ENST00000473683 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
PLXNB1-212ENST00000473683 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
PLXNB1-212ENST00000473683 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
PLXNB1-212ENST00000473683 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
PLXNB1-212ENST00000473683 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
PLXNB1-212ENST00000473683 ERCC6Q03468 1493 aa18.05■□□□□ 0.48
PLXNB1-212ENST00000473683 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
PLXNB1-212ENST00000473683 CUX2O14529 1486 aa18.03■□□□□ 0.48
PLXNB1-212ENST00000473683 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
PLXNB1-212ENST00000473683 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
PLXNB1-212ENST00000473683 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
PLXNB1-212ENST00000473683 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
PLXNB1-212ENST00000473683 NESP48681 1621 aa17.9■□□□□ 0.46
PLXNB1-212ENST00000473683 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
PLXNB1-212ENST00000473683 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
PLXNB1-212ENST00000473683 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
PLXNB1-212ENST00000473683 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
PLXNB1-212ENST00000473683 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
PLXNB1-212ENST00000473683 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PLXNB1-212ENST00000473683 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
PLXNB1-212ENST00000473683 WIZO95785 1651 aa17.55■□□□□ 0.4
PLXNB1-212ENST00000473683 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
PLXNB1-212ENST00000473683 WDR62O43379 1518 aa17.45■□□□□ 0.38
PLXNB1-212ENST00000473683 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
PLXNB1-212ENST00000473683 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
PLXNB1-212ENST00000473683 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
PLXNB1-212ENST00000473683 CFTRP13569 1480 aa17.4■□□□□ 0.38
PLXNB1-212ENST00000473683 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
PLXNB1-212ENST00000473683 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
PLXNB1-212ENST00000473683 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
PLXNB1-212ENST00000473683 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
PLXNB1-212ENST00000473683 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
PLXNB1-212ENST00000473683 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
PLXNB1-212ENST00000473683 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
PLXNB1-212ENST00000473683 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
PLXNB1-212ENST00000473683 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
PLXNB1-212ENST00000473683 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
PLXNB1-212ENST00000473683 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
PLXNB1-212ENST00000473683 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.3
PLXNB1-212ENST00000473683 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
PLXNB1-212ENST00000473683 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
PLXNB1-212ENST00000473683 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
PLXNB1-212ENST00000473683 EIF4G3O43432 1585 aaKnown RBP16.92■□□□□ 0.3
PLXNB1-212ENST00000473683 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
PLXNB1-212ENST00000473683 FBLN2P98095 1184 aa16.9■□□□□ 0.3
PLXNB1-212ENST00000473683 TARBP1Q13395 1621 aaKnown RBP16.89■□□□□ 0.29
PLXNB1-212ENST00000473683 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PLXNB1-212ENST00000473683 CYB5RLQ6IPT4 315 aa16.89■□□□□ 0.29
PLXNB1-212ENST00000473683 SOGA1O94964 1423 aa16.86■□□□□ 0.29
PLXNB1-212ENST00000473683 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
PLXNB1-212ENST00000473683 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
PLXNB1-212ENST00000473683 CHD1O14646 1710 aa16.79■□□□□ 0.28
PLXNB1-212ENST00000473683 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
PLXNB1-212ENST00000473683 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
PLXNB1-212ENST00000473683 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
PLXNB1-212ENST00000473683 CUX1P39880 1505 aa16.73■□□□□ 0.27
PLXNB1-212ENST00000473683 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
PLXNB1-212ENST00000473683 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
PLXNB1-212ENST00000473683 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
PLXNB1-212ENST00000473683 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
PLXNB1-212ENST00000473683 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
PLXNB1-212ENST00000473683 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
PLXNB1-212ENST00000473683 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
PLXNB1-212ENST00000473683 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
PLXNB1-212ENST00000473683 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
PLXNB1-212ENST00000473683 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
PLXNB1-212ENST00000473683 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
PLXNB1-212ENST00000473683 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
PLXNB1-212ENST00000473683 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
PLXNB1-212ENST00000473683 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
PLXNB1-212ENST00000473683 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
PLXNB1-212ENST00000473683 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
PLXNB1-212ENST00000473683 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
PLXNB1-212ENST00000473683 NUP160Q12769 1436 aa16.42■□□□□ 0.22
PLXNB1-212ENST00000473683 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
PLXNB1-212ENST00000473683 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
PLXNB1-212ENST00000473683 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
PLXNB1-212ENST00000473683 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
PLXNB1-212ENST00000473683 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
PLXNB1-212ENST00000473683 JPH4Q96JJ6 628 aa16.33■□□□□ 0.2
PLXNB1-212ENST00000473683 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
PLXNB1-212ENST00000473683 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
PLXNB1-212ENST00000473683 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-212ENST00000473683 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms