RNA–Protein interactions for RNA: ENST00000261523.9

RORA-201, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-201ENST00000261523 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
RORA-201ENST00000261523 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
RORA-201ENST00000261523 CHIC1Q5VXU3 224 aa13.94□□□□□ -0.18
RORA-201ENST00000261523 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
RORA-201ENST00000261523 ABCC9O60706 1549 aa13.64□□□□□ -0.23
RORA-201ENST00000261523 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
RORA-201ENST00000261523 NACADO15069 1562 aa13.1□□□□□ -0.31
RORA-201ENST00000261523 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
RORA-201ENST00000261523 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
RORA-201ENST00000261523 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
RORA-201ENST00000261523 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
RORA-201ENST00000261523 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
RORA-201ENST00000261523 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
RORA-201ENST00000261523 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
RORA-201ENST00000261523 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
RORA-201ENST00000261523 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
RORA-201ENST00000261523 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
RORA-201ENST00000261523 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
RORA-201ENST00000261523 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
RORA-201ENST00000261523 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
RORA-201ENST00000261523 CECR2Q9BXF3 1484 aa12.32□□□□□ -0.44
RORA-201ENST00000261523 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
RORA-201ENST00000261523 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
RORA-201ENST00000261523 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
RORA-201ENST00000261523 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
RORA-201ENST00000261523 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
RORA-201ENST00000261523 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
RORA-201ENST00000261523 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
RORA-201ENST00000261523 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
RORA-201ENST00000261523 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
RORA-201ENST00000261523 SUPT5HO00267 1087 aaKnown RBP11.91□□□□□ -0.5
RORA-201ENST00000261523 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
RORA-201ENST00000261523 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
RORA-201ENST00000261523 CUX2O14529 1486 aa11.81□□□□□ -0.52
RORA-201ENST00000261523 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
RORA-201ENST00000261523 WIZO95785 1651 aa11.75□□□□□ -0.53
RORA-201ENST00000261523 NESP48681 1621 aa11.74□□□□□ -0.53
RORA-201ENST00000261523 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.54
RORA-201ENST00000261523 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
RORA-201ENST00000261523 THOC2Q8NI27 1593 aaKnown RBP11.68□□□□□ -0.54
RORA-201ENST00000261523 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
RORA-201ENST00000261523 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
RORA-201ENST00000261523 KIF21AQ7Z4S6 1674 aa11.66□□□□□ -0.54
RORA-201ENST00000261523 CFTRP13569 1480 aa11.58□□□□□ -0.55
RORA-201ENST00000261523 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.55
RORA-201ENST00000261523 DNAJC5Q9H3Z4 198 aa11.58□□□□□ -0.56
RORA-201ENST00000261523 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
RORA-201ENST00000261523 WDR62O43379 1518 aa11.56□□□□□ -0.56
RORA-201ENST00000261523 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
RORA-201ENST00000261523 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
RORA-201ENST00000261523 HRCP23327 699 aa11.52□□□□□ -0.57
RORA-201ENST00000261523 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
RORA-201ENST00000261523 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
RORA-201ENST00000261523 PCGF6Q9BYE7 350 aa11.4□□□□□ -0.58
RORA-201ENST00000261523 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
RORA-201ENST00000261523 DNMBPQ6XZF7 1577 aa11.34□□□□□ -0.59
RORA-201ENST00000261523 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
RORA-201ENST00000261523 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
RORA-201ENST00000261523 TOPBP1Q92547 1522 aa11.33□□□□□ -0.59
RORA-201ENST00000261523 FOXD1Q16676 465 aa11.32□□□□□ -0.6
RORA-201ENST00000261523 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
RORA-201ENST00000261523 PPARGC1BQ86YN6 1023 aaKnown RBP11.26□□□□□ -0.61
RORA-201ENST00000261523 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
RORA-201ENST00000261523 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
RORA-201ENST00000261523 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
RORA-201ENST00000261523 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
RORA-201ENST00000261523 ZNF608Q9ULD9 1512 aaPredicted RBP11.23□□□□□ -0.61
RORA-201ENST00000261523 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
RORA-201ENST00000261523 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
RORA-201ENST00000261523 CUX1P39880 1505 aa11.17□□□□□ -0.62
RORA-201ENST00000261523 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
RORA-201ENST00000261523 SOGA1O94964 1423 aa11.17□□□□□ -0.62
RORA-201ENST00000261523 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.631e-6■□□□□ 10.6
RORA-201ENST00000261523 CHD1O14646 1710 aa11.13□□□□□ -0.63
RORA-201ENST00000261523 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
RORA-201ENST00000261523 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
RORA-201ENST00000261523 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
RORA-201ENST00000261523 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
RORA-201ENST00000261523 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 RIMBP3CA6NJZ7 1639 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 RIMBP3BA6NNM3 1639 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 RIMBP3Q9UFD9 1639 aa11.08□□□□□ -0.64
RORA-201ENST00000261523 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
RORA-201ENST00000261523 PBRM1Q86U86 1689 aa11.07□□□□□ -0.64
RORA-201ENST00000261523 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
RORA-201ENST00000261523 ARHGEF11O15085 1522 aa11.06□□□□□ -0.64
RORA-201ENST00000261523 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
RORA-201ENST00000261523 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
RORA-201ENST00000261523 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
RORA-201ENST00000261523 SYNJ2O15056 1496 aa11.04□□□□□ -0.64
RORA-201ENST00000261523 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
RORA-201ENST00000261523 FBLN2P98095 1184 aa11.03□□□□□ -0.64
RORA-201ENST00000261523 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
RORA-201ENST00000261523 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
RORA-201ENST00000261523 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
RORA-201ENST00000261523 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
RORA-201ENST00000261523 ERICH3Q5RHP9 1530 aa10.97□□□□□ -0.65
RORA-201ENST00000261523 ADAMTS12P58397 1594 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms