RNA–Protein interactions for RNA: ENST00000548869.1

FAM216A-206, Transcript of family with sequence similarity 216 member A, humanhuman

TSL 2

Gene FAM216A, Length 1,160 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM216A-206ENST00000548869 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
FAM216A-206ENST00000548869 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
FAM216A-206ENST00000548869 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
FAM216A-206ENST00000548869 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
FAM216A-206ENST00000548869 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
FAM216A-206ENST00000548869 FOXD1Q16676 465 aa17.99■□□□□ 0.47
FAM216A-206ENST00000548869 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
FAM216A-206ENST00000548869 ADRA2BP18089 450 aa17.48■□□□□ 0.39
FAM216A-206ENST00000548869 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
FAM216A-206ENST00000548869 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
FAM216A-206ENST00000548869 MSH5O43196 834 aa16.53■□□□□ 0.24
FAM216A-206ENST00000548869 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
FAM216A-206ENST00000548869 KCNA4P22459 653 aa16.26■□□□□ 0.19
FAM216A-206ENST00000548869 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
FAM216A-206ENST00000548869 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
FAM216A-206ENST00000548869 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
FAM216A-206ENST00000548869 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
FAM216A-206ENST00000548869 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
FAM216A-206ENST00000548869 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
FAM216A-206ENST00000548869 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
FAM216A-206ENST00000548869 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
FAM216A-206ENST00000548869 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
FAM216A-206ENST00000548869 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
FAM216A-206ENST00000548869 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
FAM216A-206ENST00000548869 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
FAM216A-206ENST00000548869 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
FAM216A-206ENST00000548869 CCDC180Q9P1Z9 1646 aa15.04■□□□□ -0
FAM216A-206ENST00000548869 ZBTB22O15209 634 aa14.97□□□□□ -0.01
FAM216A-206ENST00000548869 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
FAM216A-206ENST00000548869 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
FAM216A-206ENST00000548869 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
FAM216A-206ENST00000548869 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
FAM216A-206ENST00000548869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
FAM216A-206ENST00000548869 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
FAM216A-206ENST00000548869 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
FAM216A-206ENST00000548869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
FAM216A-206ENST00000548869 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
FAM216A-206ENST00000548869 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
FAM216A-206ENST00000548869 MYO15BQ96JP2 1530 aa14.28□□□□□ -0.12
FAM216A-206ENST00000548869 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
FAM216A-206ENST00000548869 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
FAM216A-206ENST00000548869 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
FAM216A-206ENST00000548869 APLP2Q06481 763 aa14.16□□□□□ -0.14
FAM216A-206ENST00000548869 ABCC9O60706 1549 aa14.14□□□□□ -0.15
FAM216A-206ENST00000548869 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
FAM216A-206ENST00000548869 NACADO15069 1562 aa14.09□□□□□ -0.15
FAM216A-206ENST00000548869 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
FAM216A-206ENST00000548869 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
FAM216A-206ENST00000548869 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
FAM216A-206ENST00000548869 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
FAM216A-206ENST00000548869 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
FAM216A-206ENST00000548869 CAPN15O75808 1086 aa13.83□□□□□ -0.2
FAM216A-206ENST00000548869 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
FAM216A-206ENST00000548869 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
FAM216A-206ENST00000548869 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
FAM216A-206ENST00000548869 POLA2Q14181 598 aa13.66□□□□□ -0.22
FAM216A-206ENST00000548869 FKBP8Q14318 412 aa13.62□□□□□ -0.23
FAM216A-206ENST00000548869 ABCB7O75027 752 aa13.57□□□□□ -0.24
FAM216A-206ENST00000548869 DSG3P32926 999 aa13.57□□□□□ -0.24
FAM216A-206ENST00000548869 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
FAM216A-206ENST00000548869 FBLN2P98095 1184 aa13.55□□□□□ -0.24
FAM216A-206ENST00000548869 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
FAM216A-206ENST00000548869 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
FAM216A-206ENST00000548869 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
FAM216A-206ENST00000548869 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
FAM216A-206ENST00000548869 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
FAM216A-206ENST00000548869 PROM2Q8N271 834 aa13.27□□□□□ -0.29
FAM216A-206ENST00000548869 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
FAM216A-206ENST00000548869 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
FAM216A-206ENST00000548869 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
FAM216A-206ENST00000548869 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
FAM216A-206ENST00000548869 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
FAM216A-206ENST00000548869 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM216A-206ENST00000548869 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
FAM216A-206ENST00000548869 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
FAM216A-206ENST00000548869 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
FAM216A-206ENST00000548869 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
FAM216A-206ENST00000548869 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
FAM216A-206ENST00000548869 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
FAM216A-206ENST00000548869 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
FAM216A-206ENST00000548869 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
FAM216A-206ENST00000548869 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
FAM216A-206ENST00000548869 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
FAM216A-206ENST00000548869 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
FAM216A-206ENST00000548869 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
FAM216A-206ENST00000548869 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
FAM216A-206ENST00000548869 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
FAM216A-206ENST00000548869 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
FAM216A-206ENST00000548869 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
FAM216A-206ENST00000548869 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
FAM216A-206ENST00000548869 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
FAM216A-206ENST00000548869 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
FAM216A-206ENST00000548869 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
FAM216A-206ENST00000548869 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
FAM216A-206ENST00000548869 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
FAM216A-206ENST00000548869 WIZO95785 1651 aa12.75□□□□□ -0.37
FAM216A-206ENST00000548869 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
FAM216A-206ENST00000548869 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
FAM216A-206ENST00000548869 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
FAM216A-206ENST00000548869 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms