Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 HSPA8P5-201ENST00000456928 2069 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MTHFRP42898 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 PSME2P2-201ENST00000453033 700 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 TPT1P6-201ENST00000458298 514 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 RN7SL672P-201ENST00000474091 317 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.23□□□□□ -0.13
MTHFRP42898 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 ABCC6P1-203ENST00000565566 1170 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.23□□□□□ -0.13
MTHFRP42898 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.23□□□□□ -0.13
MTHFRP42898 AC009041.4-201ENST00000620075 638 ntBASIC14.23□□□□□ -0.13
MTHFRP42898 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.23□□□□□ -0.13
MTHFRP42898 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.23□□□□□ -0.13
MTHFRP42898 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MTHFRP42898 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.22□□□□□ -0.13
MTHFRP42898 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.22□□□□□ -0.13
MTHFRP42898 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MTHFRP42898 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms