RNA–Protein interactions for RNA: ENST00000425654.6

CNKSR2-203, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 5,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-203ENST00000425654 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
CNKSR2-203ENST00000425654 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
CNKSR2-203ENST00000425654 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
CNKSR2-203ENST00000425654 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
CNKSR2-203ENST00000425654 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
CNKSR2-203ENST00000425654 PELP1Q8IZL8 1130 aaKnown RBP22.53■■□□□ 1.2
CNKSR2-203ENST00000425654 APLP2Q06481 763 aa22.51■■□□□ 1.19
CNKSR2-203ENST00000425654 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
CNKSR2-203ENST00000425654 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
CNKSR2-203ENST00000425654 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
CNKSR2-203ENST00000425654 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
CNKSR2-203ENST00000425654 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
CNKSR2-203ENST00000425654 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
CNKSR2-203ENST00000425654 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
CNKSR2-203ENST00000425654 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
CNKSR2-203ENST00000425654 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
CNKSR2-203ENST00000425654 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
CNKSR2-203ENST00000425654 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
CNKSR2-203ENST00000425654 MYT1Q01538 1121 aa21.31■■□□□ 1
CNKSR2-203ENST00000425654 NEFLP07196 543 aa21.3■■□□□ 1
CNKSR2-203ENST00000425654 YTHDC1Q96MU7 727 aaKnown RBP21.2■□□□□ 0.98
CNKSR2-203ENST00000425654 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
CNKSR2-203ENST00000425654 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
CNKSR2-203ENST00000425654 HRCP23327 699 aa21.04■□□□□ 0.96
CNKSR2-203ENST00000425654 ITGAEP38570 1179 aa20.91■□□□□ 0.94
CNKSR2-203ENST00000425654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
CNKSR2-203ENST00000425654 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
CNKSR2-203ENST00000425654 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
CNKSR2-203ENST00000425654 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.92
CNKSR2-203ENST00000425654 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.92
CNKSR2-203ENST00000425654 POLR3GLQ9BT43 218 aa20.78■□□□□ 0.92
CNKSR2-203ENST00000425654 DAXXQ9UER7 740 aaPredicted RBP20.68■□□□□ 0.9
CNKSR2-203ENST00000425654 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
CNKSR2-203ENST00000425654 FAM50AQ14320 339 aaKnown RBP20.42■□□□□ 0.86
CNKSR2-203ENST00000425654 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
CNKSR2-203ENST00000425654 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
CNKSR2-203ENST00000425654 ABCC9O60706 1549 aa20.34■□□□□ 0.85
CNKSR2-203ENST00000425654 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
CNKSR2-203ENST00000425654 TRIM52Q96A61 297 aa20.31■□□□□ 0.84
CNKSR2-203ENST00000425654 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
CNKSR2-203ENST00000425654 NEUROD1Q13562 356 aa20.22■□□□□ 0.83
CNKSR2-203ENST00000425654 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
CNKSR2-203ENST00000425654 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
CNKSR2-203ENST00000425654 ANP32CO43423 234 aa20.09■□□□□ 0.81
CNKSR2-203ENST00000425654 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
CNKSR2-203ENST00000425654 FBLN2P98095 1184 aa19.99■□□□□ 0.79
CNKSR2-203ENST00000425654 GTF3C3Q9Y5Q9 886 aa19.98■□□□□ 0.79
CNKSR2-203ENST00000425654 BCANQ96GW7 911 aa19.96■□□□□ 0.79
CNKSR2-203ENST00000425654 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
CNKSR2-203ENST00000425654 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
CNKSR2-203ENST00000425654 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CNKSR2-203ENST00000425654 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
CNKSR2-203ENST00000425654 ACIN1Q9UKV3 1341 aaKnown RBP19.81■□□□□ 0.76
CNKSR2-203ENST00000425654 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
CNKSR2-203ENST00000425654 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
CNKSR2-203ENST00000425654 NEFMP07197 916 aa19.76■□□□□ 0.75
CNKSR2-203ENST00000425654 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
CNKSR2-203ENST00000425654 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
CNKSR2-203ENST00000425654 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
CNKSR2-203ENST00000425654 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
CNKSR2-203ENST00000425654 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
CNKSR2-203ENST00000425654 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
CNKSR2-203ENST00000425654 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.72
CNKSR2-203ENST00000425654 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
CNKSR2-203ENST00000425654 ESF1Q9H501 851 aaKnown RBP19.49■□□□□ 0.71
CNKSR2-203ENST00000425654 CHGAP10645 457 aaKnown RBP19.44■□□□□ 0.7
CNKSR2-203ENST00000425654 NPM2Q86SE8 214 aaKnown RBP19.43■□□□□ 0.7
CNKSR2-203ENST00000425654 FKBP8Q14318 412 aa19.43■□□□□ 0.7
CNKSR2-203ENST00000425654 HNRNPUQ00839 825 aaKnown RBP eCLIP19.42■□□□□ 0.7
CNKSR2-203ENST00000425654 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
CNKSR2-203ENST00000425654 DDX10Q13206 875 aaKnown RBP19.4■□□□□ 0.7
CNKSR2-203ENST00000425654 NPM1P06748 294 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNKSR2-203ENST00000425654 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
CNKSR2-203ENST00000425654 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
CNKSR2-203ENST00000425654 UPF2Q9HAU5 1272 aaKnown RBP19.31■□□□□ 0.68
CNKSR2-203ENST00000425654 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
CNKSR2-203ENST00000425654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
CNKSR2-203ENST00000425654 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
CNKSR2-203ENST00000425654 HSP90AA1P07900 732 aaKnown RBP19.28■□□□□ 0.68
CNKSR2-203ENST00000425654 TSPY4P0CV99 314 aa19.28■□□□□ 0.68
CNKSR2-203ENST00000425654 TSPY10P0CW01 314 aa19.28■□□□□ 0.68
CNKSR2-203ENST00000425654 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
CNKSR2-203ENST00000425654 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
CNKSR2-203ENST00000425654 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
CNKSR2-203ENST00000425654 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
CNKSR2-203ENST00000425654 CLIP1P30622 1438 aa19.23■□□□□ 0.67
CNKSR2-203ENST00000425654 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
CNKSR2-203ENST00000425654 CCDC136Q96JN2 1154 aa19.21■□□□□ 0.67
CNKSR2-203ENST00000425654 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
CNKSR2-203ENST00000425654 KDM2AQ9Y2K7 1162 aa19.19■□□□□ 0.66
CNKSR2-203ENST00000425654 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
CNKSR2-203ENST00000425654 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
CNKSR2-203ENST00000425654 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
CNKSR2-203ENST00000425654 EEA1Q15075 1411 aa19.13■□□□□ 0.65
CNKSR2-203ENST00000425654 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.65
CNKSR2-203ENST00000425654 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
CNKSR2-203ENST00000425654 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
CNKSR2-203ENST00000425654 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.65
CNKSR2-203ENST00000425654 MIER1Q8N108 512 aa19.07■□□□□ 0.64
CNKSR2-203ENST00000425654 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms