RNA–Protein interactions for RNA: ENST00000589994.5

PRKACA-208, Transcript of protein kinase cAMP-activated catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PRKACA, Length 1,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACA-208ENST00000589994 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
PRKACA-208ENST00000589994 ABCC9O60706 1549 aa29.09■■■□□ 2.25
PRKACA-208ENST00000589994 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
PRKACA-208ENST00000589994 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
PRKACA-208ENST00000589994 NACADO15069 1562 aa27.35■■□□□ 1.97
PRKACA-208ENST00000589994 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
PRKACA-208ENST00000589994 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
PRKACA-208ENST00000589994 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
PRKACA-208ENST00000589994 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
PRKACA-208ENST00000589994 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
PRKACA-208ENST00000589994 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
PRKACA-208ENST00000589994 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
PRKACA-208ENST00000589994 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
PRKACA-208ENST00000589994 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
PRKACA-208ENST00000589994 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
PRKACA-208ENST00000589994 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
PRKACA-208ENST00000589994 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
PRKACA-208ENST00000589994 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
PRKACA-208ENST00000589994 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
PRKACA-208ENST00000589994 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
PRKACA-208ENST00000589994 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
PRKACA-208ENST00000589994 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
PRKACA-208ENST00000589994 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
PRKACA-208ENST00000589994 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
PRKACA-208ENST00000589994 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
PRKACA-208ENST00000589994 CUX2O14529 1486 aa25.02■■□□□ 1.6
PRKACA-208ENST00000589994 NESP48681 1621 aa24.99■■□□□ 1.59
PRKACA-208ENST00000589994 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
PRKACA-208ENST00000589994 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
PRKACA-208ENST00000589994 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
PRKACA-208ENST00000589994 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
PRKACA-208ENST00000589994 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
PRKACA-208ENST00000589994 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
PRKACA-208ENST00000589994 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
PRKACA-208ENST00000589994 WIZO95785 1651 aa24.64■■□□□ 1.53
PRKACA-208ENST00000589994 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
PRKACA-208ENST00000589994 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
PRKACA-208ENST00000589994 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
PRKACA-208ENST00000589994 WDR62O43379 1518 aa24.35■■□□□ 1.49
PRKACA-208ENST00000589994 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
PRKACA-208ENST00000589994 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
PRKACA-208ENST00000589994 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
PRKACA-208ENST00000589994 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
PRKACA-208ENST00000589994 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
PRKACA-208ENST00000589994 CFTRP13569 1480 aa24.15■■□□□ 1.46
PRKACA-208ENST00000589994 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
PRKACA-208ENST00000589994 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
PRKACA-208ENST00000589994 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
PRKACA-208ENST00000589994 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PRKACA-208ENST00000589994 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
PRKACA-208ENST00000589994 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
PRKACA-208ENST00000589994 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
PRKACA-208ENST00000589994 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
PRKACA-208ENST00000589994 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
PRKACA-208ENST00000589994 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
PRKACA-208ENST00000589994 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
PRKACA-208ENST00000589994 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
PRKACA-208ENST00000589994 CHD1O14646 1710 aa23.67■■□□□ 1.38
PRKACA-208ENST00000589994 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
PRKACA-208ENST00000589994 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
PRKACA-208ENST00000589994 ARHGEF11O15085 1522 aa23.56■■□□□ 1.36
PRKACA-208ENST00000589994 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
PRKACA-208ENST00000589994 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
PRKACA-208ENST00000589994 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
PRKACA-208ENST00000589994 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
PRKACA-208ENST00000589994 CUX1P39880 1505 aa23.36■■□□□ 1.33
PRKACA-208ENST00000589994 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
PRKACA-208ENST00000589994 FBLN2P98095 1184 aa23.34■■□□□ 1.33
PRKACA-208ENST00000589994 SOGA1O94964 1423 aa23.33■■□□□ 1.33
PRKACA-208ENST00000589994 TDRD9Q8NDG6 1382 aaKnown RBP23.33■■□□□ 1.33
PRKACA-208ENST00000589994 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
PRKACA-208ENST00000589994 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
PRKACA-208ENST00000589994 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
PRKACA-208ENST00000589994 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
PRKACA-208ENST00000589994 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
PRKACA-208ENST00000589994 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
PRKACA-208ENST00000589994 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
PRKACA-208ENST00000589994 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
PRKACA-208ENST00000589994 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
PRKACA-208ENST00000589994 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
PRKACA-208ENST00000589994 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
PRKACA-208ENST00000589994 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
PRKACA-208ENST00000589994 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
PRKACA-208ENST00000589994 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
PRKACA-208ENST00000589994 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
PRKACA-208ENST00000589994 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
PRKACA-208ENST00000589994 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
PRKACA-208ENST00000589994 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
PRKACA-208ENST00000589994 ERCC6L2Q5T890 1561 aa22.94■■□□□ 1.26
PRKACA-208ENST00000589994 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
PRKACA-208ENST00000589994 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
PRKACA-208ENST00000589994 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
PRKACA-208ENST00000589994 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
PRKACA-208ENST00000589994 NUP160Q12769 1436 aa22.8■■□□□ 1.24
PRKACA-208ENST00000589994 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
PRKACA-208ENST00000589994 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
PRKACA-208ENST00000589994 KIF13AQ9H1H9 1805 aa22.7■■□□□ 1.22
PRKACA-208ENST00000589994 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
PRKACA-208ENST00000589994 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
PRKACA-208ENST00000589994 CUL7Q14999 1698 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms