Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 AC098935.1-201ENST00000446057 611 ntBASIC14.15□□□□□ -0.14
SCG3Q8WXD2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 CHCHD2P2-201ENST00000503744 321 ntBASIC14.15□□□□□ -0.14
SCG3Q8WXD2 AC114947.1-202ENST00000514136 344 ntBASIC14.15□□□□□ -0.14
SCG3Q8WXD2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 ABCD1P2-201ENST00000429313 1601 ntBASIC14.15□□□□□ -0.14
SCG3Q8WXD2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
SCG3Q8WXD2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AC069218.1-201ENST00000435269 762 ntBASIC14.14□□□□□ -0.15
SCG3Q8WXD2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AC007326.1-201ENST00000604539 458 ntBASIC14.14□□□□□ -0.15
SCG3Q8WXD2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AL805961.1-201ENST00000642026 753 ntBASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AL805961.2-201ENST00000642139 4817 ntBASIC14.14□□□□□ -0.15
SCG3Q8WXD2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCG3Q8WXD2 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms