RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 NISCHQ9Y2I1 1504 aa28.88■■■□□ 2.21
CACNA1C-231ENST00000616390 SHROOM4Q9ULL8 1493 aa24.9■■□□□ 1.58
CACNA1C-231ENST00000616390 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
CACNA1C-231ENST00000616390 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
CACNA1C-231ENST00000616390 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
CACNA1C-231ENST00000616390 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
CACNA1C-231ENST00000616390 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
CACNA1C-231ENST00000616390 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
CACNA1C-231ENST00000616390 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
CACNA1C-231ENST00000616390 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
CACNA1C-231ENST00000616390 ABCC9O60706 1549 aa23.13■■□□□ 1.29
CACNA1C-231ENST00000616390 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
CACNA1C-231ENST00000616390 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
CACNA1C-231ENST00000616390 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
CACNA1C-231ENST00000616390 NACADO15069 1562 aa22.73■■□□□ 1.23
CACNA1C-231ENST00000616390 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
CACNA1C-231ENST00000616390 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
CACNA1C-231ENST00000616390 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
CACNA1C-231ENST00000616390 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
CACNA1C-231ENST00000616390 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
CACNA1C-231ENST00000616390 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
CACNA1C-231ENST00000616390 HRCP23327 699 aa22.45■■□□□ 1.18
CACNA1C-231ENST00000616390 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
CACNA1C-231ENST00000616390 WIZO95785 1651 aa22.43■■□□□ 1.18
CACNA1C-231ENST00000616390 MYT1Q01538 1121 aa22.28■■□□□ 1.16
CACNA1C-231ENST00000616390 PPARGC1BQ86YN6 1023 aaKnown RBP22.22■■□□□ 1.15
CACNA1C-231ENST00000616390 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
CACNA1C-231ENST00000616390 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
CACNA1C-231ENST00000616390 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
CACNA1C-231ENST00000616390 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
CACNA1C-231ENST00000616390 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
CACNA1C-231ENST00000616390 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
CACNA1C-231ENST00000616390 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
CACNA1C-231ENST00000616390 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
CACNA1C-231ENST00000616390 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
CACNA1C-231ENST00000616390 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
CACNA1C-231ENST00000616390 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
CACNA1C-231ENST00000616390 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
CACNA1C-231ENST00000616390 SOGA1O94964 1423 aa21.69■■□□□ 1.06
CACNA1C-231ENST00000616390 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
CACNA1C-231ENST00000616390 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
CACNA1C-231ENST00000616390 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
CACNA1C-231ENST00000616390 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
CACNA1C-231ENST00000616390 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
CACNA1C-231ENST00000616390 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
CACNA1C-231ENST00000616390 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
CACNA1C-231ENST00000616390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
CACNA1C-231ENST00000616390 CEP162Q5TB80 1403 aa21.48■■□□□ 1.03
CACNA1C-231ENST00000616390 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
CACNA1C-231ENST00000616390 SLC24A1O60721 1099 aa21.47■■□□□ 1.03
CACNA1C-231ENST00000616390 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
CACNA1C-231ENST00000616390 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.01
CACNA1C-231ENST00000616390 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
CACNA1C-231ENST00000616390 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
CACNA1C-231ENST00000616390 EEA1Q15075 1411 aa21.36■■□□□ 1.01
CACNA1C-231ENST00000616390 PRKCSHP14314 528 aaPredicted RBP21.33■■□□□ 1.01
CACNA1C-231ENST00000616390 GOLGA3Q08378 1498 aa21.31■■□□□ 1
CACNA1C-231ENST00000616390 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
CACNA1C-231ENST00000616390 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.97
CACNA1C-231ENST00000616390 CLIP1P30622 1438 aa21.13■□□□□ 0.97
CACNA1C-231ENST00000616390 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
CACNA1C-231ENST00000616390 KIF21BO75037 1637 aa21.08■□□□□ 0.97
CACNA1C-231ENST00000616390 APLP2Q06481 763 aa21.08■□□□□ 0.96
CACNA1C-231ENST00000616390 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
CACNA1C-231ENST00000616390 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
CACNA1C-231ENST00000616390 HMGXB3Q12766 1538 aa21■□□□□ 0.95
CACNA1C-231ENST00000616390 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
CACNA1C-231ENST00000616390 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
CACNA1C-231ENST00000616390 CUX1P39880 1505 aa20.95■□□□□ 0.94
CACNA1C-231ENST00000616390 CFTRP13569 1480 aa20.88■□□□□ 0.93
CACNA1C-231ENST00000616390 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
CACNA1C-231ENST00000616390 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
CACNA1C-231ENST00000616390 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
CACNA1C-231ENST00000616390 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
CACNA1C-231ENST00000616390 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
CACNA1C-231ENST00000616390 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
CACNA1C-231ENST00000616390 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
CACNA1C-231ENST00000616390 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
CACNA1C-231ENST00000616390 CUX2O14529 1486 aa20.73■□□□□ 0.91
CACNA1C-231ENST00000616390 CC2D2AQ9P2K1 1620 aa20.72■□□□□ 0.91
CACNA1C-231ENST00000616390 ITGAEP38570 1179 aa20.67■□□□□ 0.9
CACNA1C-231ENST00000616390 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
CACNA1C-231ENST00000616390 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
CACNA1C-231ENST00000616390 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
CACNA1C-231ENST00000616390 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
CACNA1C-231ENST00000616390 IGF1RP08069 1367 aa20.64■□□□□ 0.89
CACNA1C-231ENST00000616390 P3H3Q8IVL6 736 aa20.63■□□□□ 0.89
CACNA1C-231ENST00000616390 ATP1B4Q9UN42 357 aaPredicted RBP20.61■□□□□ 0.89
CACNA1C-231ENST00000616390 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
CACNA1C-231ENST00000616390 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
CACNA1C-231ENST00000616390 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
CACNA1C-231ENST00000616390 NESP48681 1621 aa20.56■□□□□ 0.88
CACNA1C-231ENST00000616390 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
CACNA1C-231ENST00000616390 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
CACNA1C-231ENST00000616390 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
CACNA1C-231ENST00000616390 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
CACNA1C-231ENST00000616390 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
CACNA1C-231ENST00000616390 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
CACNA1C-231ENST00000616390 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
CACNA1C-231ENST00000616390 MIER1Q8N108 512 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms