RNA–Protein interactions for RNA: ENST00000542973.5

KDM2B-215, Transcript of lysine demethylase 2B, humanhuman

TSL 2 BASIC

Gene KDM2B, Length 3,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-215ENST00000542973 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
KDM2B-215ENST00000542973 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
KDM2B-215ENST00000542973 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
KDM2B-215ENST00000542973 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
KDM2B-215ENST00000542973 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
KDM2B-215ENST00000542973 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
KDM2B-215ENST00000542973 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
KDM2B-215ENST00000542973 HRCP23327 699 aa22.43■■□□□ 1.18
KDM2B-215ENST00000542973 CCDC180Q9P1Z9 1646 aa22.33■■□□□ 1.16
KDM2B-215ENST00000542973 PCGF6Q9BYE7 350 aa22.31■■□□□ 1.16
KDM2B-215ENST00000542973 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
KDM2B-215ENST00000542973 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
KDM2B-215ENST00000542973 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
KDM2B-215ENST00000542973 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
KDM2B-215ENST00000542973 TRIM26Q12899 539 aaPredicted RBP21.63■■□□□ 1.05
KDM2B-215ENST00000542973 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
KDM2B-215ENST00000542973 ABCC9O60706 1549 aa21.4■■□□□ 1.02
KDM2B-215ENST00000542973 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
KDM2B-215ENST00000542973 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
KDM2B-215ENST00000542973 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
KDM2B-215ENST00000542973 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
KDM2B-215ENST00000542973 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
KDM2B-215ENST00000542973 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
KDM2B-215ENST00000542973 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
KDM2B-215ENST00000542973 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
KDM2B-215ENST00000542973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.85■□□□□ 0.93
KDM2B-215ENST00000542973 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.92
KDM2B-215ENST00000542973 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
KDM2B-215ENST00000542973 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
KDM2B-215ENST00000542973 WIZO95785 1651 aa20.73■□□□□ 0.91
KDM2B-215ENST00000542973 NACADO15069 1562 aa20.62■□□□□ 0.89
KDM2B-215ENST00000542973 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
KDM2B-215ENST00000542973 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
KDM2B-215ENST00000542973 DIEXFQ68CQ4 756 aaKnown RBP20.53■□□□□ 0.88
KDM2B-215ENST00000542973 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
KDM2B-215ENST00000542973 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
KDM2B-215ENST00000542973 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
KDM2B-215ENST00000542973 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
KDM2B-215ENST00000542973 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
KDM2B-215ENST00000542973 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
KDM2B-215ENST00000542973 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
KDM2B-215ENST00000542973 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
KDM2B-215ENST00000542973 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
KDM2B-215ENST00000542973 YTHDC1Q96MU7 727 aaKnown RBP20.39■□□□□ 0.85
KDM2B-215ENST00000542973 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
KDM2B-215ENST00000542973 SOGA1O94964 1423 aa20.37■□□□□ 0.85
KDM2B-215ENST00000542973 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
KDM2B-215ENST00000542973 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
KDM2B-215ENST00000542973 TNIKQ9UKE5 1360 aa20.29■□□□□ 0.84
KDM2B-215ENST00000542973 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
KDM2B-215ENST00000542973 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
KDM2B-215ENST00000542973 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
KDM2B-215ENST00000542973 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
KDM2B-215ENST00000542973 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
KDM2B-215ENST00000542973 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
KDM2B-215ENST00000542973 EEA1Q15075 1411 aa20.14■□□□□ 0.81
KDM2B-215ENST00000542973 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
KDM2B-215ENST00000542973 MIER1Q8N108 512 aa20.07■□□□□ 0.8
KDM2B-215ENST00000542973 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
KDM2B-215ENST00000542973 CLIP1P30622 1438 aa19.96■□□□□ 0.79
KDM2B-215ENST00000542973 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
KDM2B-215ENST00000542973 APLP2Q06481 763 aa19.91■□□□□ 0.78
KDM2B-215ENST00000542973 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
KDM2B-215ENST00000542973 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
KDM2B-215ENST00000542973 KIF21BO75037 1637 aa19.85■□□□□ 0.77
KDM2B-215ENST00000542973 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
KDM2B-215ENST00000542973 MYT1Q01538 1121 aa19.82■□□□□ 0.76
KDM2B-215ENST00000542973 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
KDM2B-215ENST00000542973 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
KDM2B-215ENST00000542973 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
KDM2B-215ENST00000542973 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
KDM2B-215ENST00000542973 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
KDM2B-215ENST00000542973 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
KDM2B-215ENST00000542973 ITGAEP38570 1179 aa19.6■□□□□ 0.73
KDM2B-215ENST00000542973 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.73
KDM2B-215ENST00000542973 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
KDM2B-215ENST00000542973 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
KDM2B-215ENST00000542973 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
KDM2B-215ENST00000542973 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
KDM2B-215ENST00000542973 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
KDM2B-215ENST00000542973 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
KDM2B-215ENST00000542973 BCANQ96GW7 911 aa19.45■□□□□ 0.7
KDM2B-215ENST00000542973 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
KDM2B-215ENST00000542973 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
KDM2B-215ENST00000542973 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
KDM2B-215ENST00000542973 CCNB3Q8WWL7 1395 aa19.4■□□□□ 0.7
KDM2B-215ENST00000542973 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
KDM2B-215ENST00000542973 CUX1P39880 1505 aa19.34■□□□□ 0.69
KDM2B-215ENST00000542973 TSHZ2Q9NRE2 1034 aa19.34■□□□□ 0.69
KDM2B-215ENST00000542973 CUX2O14529 1486 aa19.33■□□□□ 0.69
KDM2B-215ENST00000542973 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
KDM2B-215ENST00000542973 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
KDM2B-215ENST00000542973 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
KDM2B-215ENST00000542973 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
KDM2B-215ENST00000542973 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
KDM2B-215ENST00000542973 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
KDM2B-215ENST00000542973 SIN3AQ96ST3 1273 aa19.23■□□□□ 0.67
KDM2B-215ENST00000542973 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
KDM2B-215ENST00000542973 SETD5Q9C0A6 1442 aa19.18■□□□□ 0.66
KDM2B-215ENST00000542973 FKBP8Q14318 412 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms