RNA–Protein interactions for RNA: ENST00000300022.7

YPEL4-201, Transcript of yippee like 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YPEL4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL4-201ENST00000300022 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.8
YPEL4-201ENST00000300022 CCDC180Q9P1Z9 1646 aa28.55■■■□□ 2.16
YPEL4-201ENST00000300022 ZCCHC6Q5VYS8 1495 aaKnown RBP27.24■■□□□ 1.95
YPEL4-201ENST00000300022 ABCC9O60706 1549 aa27.11■■□□□ 1.93
YPEL4-201ENST00000300022 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
YPEL4-201ENST00000300022 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
YPEL4-201ENST00000300022 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.88
YPEL4-201ENST00000300022 NACADO15069 1562 aa26.69■■□□□ 1.86
YPEL4-201ENST00000300022 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
YPEL4-201ENST00000300022 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
YPEL4-201ENST00000300022 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
YPEL4-201ENST00000300022 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
YPEL4-201ENST00000300022 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
YPEL4-201ENST00000300022 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
YPEL4-201ENST00000300022 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
YPEL4-201ENST00000300022 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
YPEL4-201ENST00000300022 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
YPEL4-201ENST00000300022 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
YPEL4-201ENST00000300022 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
YPEL4-201ENST00000300022 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
YPEL4-201ENST00000300022 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
YPEL4-201ENST00000300022 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
YPEL4-201ENST00000300022 WIZO95785 1651 aa24.79■■□□□ 1.56
YPEL4-201ENST00000300022 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
YPEL4-201ENST00000300022 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
YPEL4-201ENST00000300022 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
YPEL4-201ENST00000300022 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
YPEL4-201ENST00000300022 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
YPEL4-201ENST00000300022 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
YPEL4-201ENST00000300022 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
YPEL4-201ENST00000300022 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
YPEL4-201ENST00000300022 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
YPEL4-201ENST00000300022 CFTRP13569 1480 aa23.96■■□□□ 1.43
YPEL4-201ENST00000300022 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
YPEL4-201ENST00000300022 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
YPEL4-201ENST00000300022 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.4
YPEL4-201ENST00000300022 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
YPEL4-201ENST00000300022 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
YPEL4-201ENST00000300022 NESP48681 1621 aa23.68■■□□□ 1.38
YPEL4-201ENST00000300022 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
YPEL4-201ENST00000300022 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.38
YPEL4-201ENST00000300022 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
YPEL4-201ENST00000300022 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
YPEL4-201ENST00000300022 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
YPEL4-201ENST00000300022 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
YPEL4-201ENST00000300022 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
YPEL4-201ENST00000300022 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
YPEL4-201ENST00000300022 CUX1P39880 1505 aa23.43■■□□□ 1.34
YPEL4-201ENST00000300022 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
YPEL4-201ENST00000300022 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
YPEL4-201ENST00000300022 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
YPEL4-201ENST00000300022 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
YPEL4-201ENST00000300022 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.32
YPEL4-201ENST00000300022 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
YPEL4-201ENST00000300022 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
YPEL4-201ENST00000300022 EEA1Q15075 1411 aa23.24■■□□□ 1.31
YPEL4-201ENST00000300022 WDR62O43379 1518 aa23.21■■□□□ 1.31
YPEL4-201ENST00000300022 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
YPEL4-201ENST00000300022 SOGA1O94964 1423 aa23.16■■□□□ 1.3
YPEL4-201ENST00000300022 THOC2Q8NI27 1593 aaKnown RBP23.16■■□□□ 1.3
YPEL4-201ENST00000300022 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
YPEL4-201ENST00000300022 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
YPEL4-201ENST00000300022 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
YPEL4-201ENST00000300022 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
YPEL4-201ENST00000300022 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
YPEL4-201ENST00000300022 CUX2O14529 1486 aa23.05■■□□□ 1.28
YPEL4-201ENST00000300022 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
YPEL4-201ENST00000300022 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
YPEL4-201ENST00000300022 TARBP1Q13395 1621 aaKnown RBP23■■□□□ 1.27
YPEL4-201ENST00000300022 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
YPEL4-201ENST00000300022 IGF1RP08069 1367 aa22.89■■□□□ 1.26
YPEL4-201ENST00000300022 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.25
YPEL4-201ENST00000300022 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
YPEL4-201ENST00000300022 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
YPEL4-201ENST00000300022 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
YPEL4-201ENST00000300022 KIF21BO75037 1637 aa22.86■■□□□ 1.25
YPEL4-201ENST00000300022 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
YPEL4-201ENST00000300022 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
YPEL4-201ENST00000300022 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
YPEL4-201ENST00000300022 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.242e-7■■■■■ 41.9
YPEL4-201ENST00000300022 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
YPEL4-201ENST00000300022 CUL7Q14999 1698 aa22.78■■□□□ 1.24
YPEL4-201ENST00000300022 ZNF608Q9ULD9 1512 aaPredicted RBP22.78■■□□□ 1.24
YPEL4-201ENST00000300022 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
YPEL4-201ENST00000300022 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
YPEL4-201ENST00000300022 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
YPEL4-201ENST00000300022 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
YPEL4-201ENST00000300022 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
YPEL4-201ENST00000300022 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
YPEL4-201ENST00000300022 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
YPEL4-201ENST00000300022 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
YPEL4-201ENST00000300022 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.22
YPEL4-201ENST00000300022 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
YPEL4-201ENST00000300022 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
YPEL4-201ENST00000300022 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
YPEL4-201ENST00000300022 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
YPEL4-201ENST00000300022 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
YPEL4-201ENST00000300022 GRIN2AQ12879 1464 aa22.46■■□□□ 1.19
YPEL4-201ENST00000300022 CTTNBP2Q8WZ74 1663 aa22.43■■□□□ 1.18
YPEL4-201ENST00000300022 CLIP1P30622 1438 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms