RNA–Protein interactions for RNA: ENST00000372600.8

LRRC8A-203, Transcript of leucine rich repeat containing 8 VRAC subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC8A, Length 4,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8A-203ENST00000372600 NISCHQ9Y2I1 1504 aa26.31■■□□□ 1.8
LRRC8A-203ENST00000372600 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
LRRC8A-203ENST00000372600 ABCC9O60706 1549 aa23.83■■□□□ 1.41
LRRC8A-203ENST00000372600 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
LRRC8A-203ENST00000372600 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
LRRC8A-203ENST00000372600 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
LRRC8A-203ENST00000372600 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
LRRC8A-203ENST00000372600 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
LRRC8A-203ENST00000372600 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
LRRC8A-203ENST00000372600 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
LRRC8A-203ENST00000372600 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
LRRC8A-203ENST00000372600 NACADO15069 1562 aa21.77■■□□□ 1.08
LRRC8A-203ENST00000372600 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
LRRC8A-203ENST00000372600 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
LRRC8A-203ENST00000372600 APLP2Q06481 763 aa21.48■■□□□ 1.03
LRRC8A-203ENST00000372600 FBLN2P98095 1184 aa21.44■■□□□ 1.02
LRRC8A-203ENST00000372600 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
LRRC8A-203ENST00000372600 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
LRRC8A-203ENST00000372600 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.99
LRRC8A-203ENST00000372600 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
LRRC8A-203ENST00000372600 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
LRRC8A-203ENST00000372600 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
LRRC8A-203ENST00000372600 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
LRRC8A-203ENST00000372600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
LRRC8A-203ENST00000372600 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
LRRC8A-203ENST00000372600 DCAF1Q9Y4B6 1507 aa20.97■□□□□ 0.95
LRRC8A-203ENST00000372600 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
LRRC8A-203ENST00000372600 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
LRRC8A-203ENST00000372600 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
LRRC8A-203ENST00000372600 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
LRRC8A-203ENST00000372600 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
LRRC8A-203ENST00000372600 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
LRRC8A-203ENST00000372600 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
LRRC8A-203ENST00000372600 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
LRRC8A-203ENST00000372600 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
LRRC8A-203ENST00000372600 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
LRRC8A-203ENST00000372600 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
LRRC8A-203ENST00000372600 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
LRRC8A-203ENST00000372600 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
LRRC8A-203ENST00000372600 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
LRRC8A-203ENST00000372600 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
LRRC8A-203ENST00000372600 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
LRRC8A-203ENST00000372600 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
LRRC8A-203ENST00000372600 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
LRRC8A-203ENST00000372600 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
LRRC8A-203ENST00000372600 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
LRRC8A-203ENST00000372600 ITGAEP38570 1179 aa20.37■□□□□ 0.85
LRRC8A-203ENST00000372600 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
LRRC8A-203ENST00000372600 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
LRRC8A-203ENST00000372600 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
LRRC8A-203ENST00000372600 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
LRRC8A-203ENST00000372600 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
LRRC8A-203ENST00000372600 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
LRRC8A-203ENST00000372600 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
LRRC8A-203ENST00000372600 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
LRRC8A-203ENST00000372600 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
LRRC8A-203ENST00000372600 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
LRRC8A-203ENST00000372600 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.82
LRRC8A-203ENST00000372600 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
LRRC8A-203ENST00000372600 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
LRRC8A-203ENST00000372600 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
LRRC8A-203ENST00000372600 NESP48681 1621 aa20.08■□□□□ 0.8
LRRC8A-203ENST00000372600 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
LRRC8A-203ENST00000372600 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
LRRC8A-203ENST00000372600 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
LRRC8A-203ENST00000372600 SOGA1O94964 1423 aa20.01■□□□□ 0.79
LRRC8A-203ENST00000372600 WIZO95785 1651 aa20■□□□□ 0.79
LRRC8A-203ENST00000372600 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
LRRC8A-203ENST00000372600 ESF1Q9H501 851 aaKnown RBP19.96■□□□□ 0.79
LRRC8A-203ENST00000372600 CDK11AQ9UQ88 783 aaPredicted RBP19.94■□□□□ 0.78
LRRC8A-203ENST00000372600 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
LRRC8A-203ENST00000372600 HRCP23327 699 aa19.92■□□□□ 0.78
LRRC8A-203ENST00000372600 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
LRRC8A-203ENST00000372600 CUX2O14529 1486 aa19.86■□□□□ 0.77
LRRC8A-203ENST00000372600 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
LRRC8A-203ENST00000372600 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
LRRC8A-203ENST00000372600 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
LRRC8A-203ENST00000372600 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
LRRC8A-203ENST00000372600 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
LRRC8A-203ENST00000372600 ARID4BQ4LE39 1312 aaPredicted RBP19.79■□□□□ 0.76
LRRC8A-203ENST00000372600 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
LRRC8A-203ENST00000372600 MRC2Q9UBG0 1479 aa19.74■□□□□ 0.75
LRRC8A-203ENST00000372600 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
LRRC8A-203ENST00000372600 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
LRRC8A-203ENST00000372600 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
LRRC8A-203ENST00000372600 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
LRRC8A-203ENST00000372600 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
LRRC8A-203ENST00000372600 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
LRRC8A-203ENST00000372600 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
LRRC8A-203ENST00000372600 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
LRRC8A-203ENST00000372600 BCANQ96GW7 911 aa19.63■□□□□ 0.73
LRRC8A-203ENST00000372600 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
LRRC8A-203ENST00000372600 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
LRRC8A-203ENST00000372600 CFTRP13569 1480 aa19.59■□□□□ 0.73
LRRC8A-203ENST00000372600 MYT1Q01538 1121 aa19.58■□□□□ 0.73
LRRC8A-203ENST00000372600 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
LRRC8A-203ENST00000372600 NEUROD1Q13562 356 aa19.54■□□□□ 0.72
LRRC8A-203ENST00000372600 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
LRRC8A-203ENST00000372600 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
LRRC8A-203ENST00000372600 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms