RNA–Protein interactions for RNA: ENST00000435575.5

TMEM40-205, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM40, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-205ENST00000435575 NISCHQ9Y2I1 1504 aa31.32■■■□□ 2.6
TMEM40-205ENST00000435575 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
TMEM40-205ENST00000435575 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
TMEM40-205ENST00000435575 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
TMEM40-205ENST00000435575 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
TMEM40-205ENST00000435575 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
TMEM40-205ENST00000435575 ABCC9O60706 1549 aa25.67■■□□□ 1.7
TMEM40-205ENST00000435575 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
TMEM40-205ENST00000435575 NACADO15069 1562 aa25.38■■□□□ 1.65
TMEM40-205ENST00000435575 RB1CC1Q8TDY2 1594 aa25.16■■□□□ 1.62
TMEM40-205ENST00000435575 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
TMEM40-205ENST00000435575 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
TMEM40-205ENST00000435575 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
TMEM40-205ENST00000435575 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.49
TMEM40-205ENST00000435575 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
TMEM40-205ENST00000435575 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
TMEM40-205ENST00000435575 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEM40-205ENST00000435575 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
TMEM40-205ENST00000435575 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
TMEM40-205ENST00000435575 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
TMEM40-205ENST00000435575 WIZO95785 1651 aa24.01■■□□□ 1.43
TMEM40-205ENST00000435575 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
TMEM40-205ENST00000435575 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
TMEM40-205ENST00000435575 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
TMEM40-205ENST00000435575 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
TMEM40-205ENST00000435575 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
TMEM40-205ENST00000435575 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
TMEM40-205ENST00000435575 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
TMEM40-205ENST00000435575 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
TMEM40-205ENST00000435575 HMGXB3Q12766 1538 aa23.39■■□□□ 1.33
TMEM40-205ENST00000435575 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
TMEM40-205ENST00000435575 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
TMEM40-205ENST00000435575 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
TMEM40-205ENST00000435575 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
TMEM40-205ENST00000435575 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
TMEM40-205ENST00000435575 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
TMEM40-205ENST00000435575 CFTRP13569 1480 aa22.91■■□□□ 1.26
TMEM40-205ENST00000435575 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.25
TMEM40-205ENST00000435575 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
TMEM40-205ENST00000435575 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
TMEM40-205ENST00000435575 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
TMEM40-205ENST00000435575 EEA1Q15075 1411 aa22.76■■□□□ 1.23
TMEM40-205ENST00000435575 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
TMEM40-205ENST00000435575 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
TMEM40-205ENST00000435575 SOGA1O94964 1423 aa22.67■■□□□ 1.22
TMEM40-205ENST00000435575 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
TMEM40-205ENST00000435575 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
TMEM40-205ENST00000435575 CUX1P39880 1505 aa22.6■■□□□ 1.21
TMEM40-205ENST00000435575 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
TMEM40-205ENST00000435575 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.21
TMEM40-205ENST00000435575 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
TMEM40-205ENST00000435575 NESP48681 1621 aa22.53■■□□□ 1.2
TMEM40-205ENST00000435575 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
TMEM40-205ENST00000435575 CEP164Q9UPV0 1460 aa22.45■■□□□ 1.18
TMEM40-205ENST00000435575 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
TMEM40-205ENST00000435575 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
TMEM40-205ENST00000435575 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
TMEM40-205ENST00000435575 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
TMEM40-205ENST00000435575 KIF21BO75037 1637 aa22.4■■□□□ 1.18
TMEM40-205ENST00000435575 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
TMEM40-205ENST00000435575 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
TMEM40-205ENST00000435575 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
TMEM40-205ENST00000435575 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
TMEM40-205ENST00000435575 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
TMEM40-205ENST00000435575 CUX2O14529 1486 aa22.28■■□□□ 1.16
TMEM40-205ENST00000435575 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
TMEM40-205ENST00000435575 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
TMEM40-205ENST00000435575 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
TMEM40-205ENST00000435575 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
TMEM40-205ENST00000435575 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
TMEM40-205ENST00000435575 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
TMEM40-205ENST00000435575 PRXQ9BXM0 1461 aa22.2■■□□□ 1.15
TMEM40-205ENST00000435575 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
TMEM40-205ENST00000435575 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
TMEM40-205ENST00000435575 MRC2Q9UBG0 1479 aa22.14■■□□□ 1.13
TMEM40-205ENST00000435575 IGF1RP08069 1367 aa22.11■■□□□ 1.13
TMEM40-205ENST00000435575 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
TMEM40-205ENST00000435575 CLIP1P30622 1438 aa22.07■■□□□ 1.12
TMEM40-205ENST00000435575 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
TMEM40-205ENST00000435575 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
TMEM40-205ENST00000435575 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
TMEM40-205ENST00000435575 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
TMEM40-205ENST00000435575 CUL7Q14999 1698 aa22■■□□□ 1.11
TMEM40-205ENST00000435575 WDR62O43379 1518 aa21.98■■□□□ 1.11
TMEM40-205ENST00000435575 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
TMEM40-205ENST00000435575 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
TMEM40-205ENST00000435575 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
TMEM40-205ENST00000435575 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
TMEM40-205ENST00000435575 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
TMEM40-205ENST00000435575 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
TMEM40-205ENST00000435575 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
TMEM40-205ENST00000435575 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
TMEM40-205ENST00000435575 APLP2Q06481 763 aa21.85■■□□□ 1.09
TMEM40-205ENST00000435575 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
TMEM40-205ENST00000435575 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
TMEM40-205ENST00000435575 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.08
TMEM40-205ENST00000435575 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
TMEM40-205ENST00000435575 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
TMEM40-205ENST00000435575 CTTNBP2Q8WZ74 1663 aa21.77■■□□□ 1.08
TMEM40-205ENST00000435575 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms