Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC005740.1-201ENST00000515639 522 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 RN7SL455P-201ENST00000580629 282 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 MIR3188-201ENST00000583494 85 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC091271.1-201ENST00000611877 1162 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AL031719.1-201ENST00000623365 2587 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 KRT8P21-201ENST00000430398 1491 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AC018735.1-201ENST00000437208 1502 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AL645937.6-201ENST00000641122 3727 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 OR8T1P-201ENST00000421347 918 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 ALG1L13P-202ENST00000519320 584 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AC067931.2-201ENST00000623655 2003 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 AC012531.1-201ENST00000562848 2680 ntBASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC50Q8IVM0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms