RNA–Protein interactions for RNA: ENST00000323223.2

TMEM78-201, Transcript of transmembrane protein 78, humanhuman

APPRIS P1 BASIC

Gene TMEM78, Length 2,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM78-201ENST00000323223 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
TMEM78-201ENST00000323223 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
TMEM78-201ENST00000323223 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
TMEM78-201ENST00000323223 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
TMEM78-201ENST00000323223 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
TMEM78-201ENST00000323223 ABCC9O60706 1549 aa25.87■■□□□ 1.73
TMEM78-201ENST00000323223 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
TMEM78-201ENST00000323223 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
TMEM78-201ENST00000323223 NACADO15069 1562 aa25.47■■□□□ 1.67
TMEM78-201ENST00000323223 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
TMEM78-201ENST00000323223 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
TMEM78-201ENST00000323223 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
TMEM78-201ENST00000323223 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
TMEM78-201ENST00000323223 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
TMEM78-201ENST00000323223 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
TMEM78-201ENST00000323223 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
TMEM78-201ENST00000323223 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
TMEM78-201ENST00000323223 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
TMEM78-201ENST00000323223 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
TMEM78-201ENST00000323223 SMARCA4P51532 1647 aa24.14■■□□□ 1.46
TMEM78-201ENST00000323223 WIZO95785 1651 aa24.08■■□□□ 1.45
TMEM78-201ENST00000323223 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
TMEM78-201ENST00000323223 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
TMEM78-201ENST00000323223 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
TMEM78-201ENST00000323223 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
TMEM78-201ENST00000323223 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
TMEM78-201ENST00000323223 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
TMEM78-201ENST00000323223 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
TMEM78-201ENST00000323223 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
TMEM78-201ENST00000323223 NCAPD3P42695 1498 aa23.51■■□□□ 1.35
TMEM78-201ENST00000323223 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
TMEM78-201ENST00000323223 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
TMEM78-201ENST00000323223 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
TMEM78-201ENST00000323223 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
TMEM78-201ENST00000323223 CFTRP13569 1480 aa23.01■■□□□ 1.27
TMEM78-201ENST00000323223 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
TMEM78-201ENST00000323223 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
TMEM78-201ENST00000323223 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
TMEM78-201ENST00000323223 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
TMEM78-201ENST00000323223 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
TMEM78-201ENST00000323223 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.24
TMEM78-201ENST00000323223 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
TMEM78-201ENST00000323223 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
TMEM78-201ENST00000323223 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
TMEM78-201ENST00000323223 NESP48681 1621 aa22.73■■□□□ 1.23
TMEM78-201ENST00000323223 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
TMEM78-201ENST00000323223 CUX1P39880 1505 aa22.69■■□□□ 1.22
TMEM78-201ENST00000323223 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
TMEM78-201ENST00000323223 SOGA1O94964 1423 aa22.66■■□□□ 1.22
TMEM78-201ENST00000323223 EEA1Q15075 1411 aa22.6■■□□□ 1.21
TMEM78-201ENST00000323223 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
TMEM78-201ENST00000323223 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
TMEM78-201ENST00000323223 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
TMEM78-201ENST00000323223 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
TMEM78-201ENST00000323223 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
TMEM78-201ENST00000323223 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
TMEM78-201ENST00000323223 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
TMEM78-201ENST00000323223 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
TMEM78-201ENST00000323223 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
TMEM78-201ENST00000323223 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
TMEM78-201ENST00000323223 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
TMEM78-201ENST00000323223 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.17
TMEM78-201ENST00000323223 KIF21BO75037 1637 aa22.33■■□□□ 1.16
TMEM78-201ENST00000323223 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
TMEM78-201ENST00000323223 CUX2O14529 1486 aa22.3■■□□□ 1.16
TMEM78-201ENST00000323223 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
TMEM78-201ENST00000323223 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
TMEM78-201ENST00000323223 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
TMEM78-201ENST00000323223 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
TMEM78-201ENST00000323223 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
TMEM78-201ENST00000323223 PRXQ9BXM0 1461 aa22.2■■□□□ 1.15
TMEM78-201ENST00000323223 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
TMEM78-201ENST00000323223 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
TMEM78-201ENST00000323223 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
TMEM78-201ENST00000323223 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
TMEM78-201ENST00000323223 WDR62O43379 1518 aa22.14■■□□□ 1.14
TMEM78-201ENST00000323223 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
TMEM78-201ENST00000323223 IGF1RP08069 1367 aa22.13■■□□□ 1.13
TMEM78-201ENST00000323223 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
TMEM78-201ENST00000323223 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
TMEM78-201ENST00000323223 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
TMEM78-201ENST00000323223 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
TMEM78-201ENST00000323223 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
TMEM78-201ENST00000323223 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
TMEM78-201ENST00000323223 CUL7Q14999 1698 aa21.99■■□□□ 1.11
TMEM78-201ENST00000323223 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
TMEM78-201ENST00000323223 CLIP1P30622 1438 aa21.95■■□□□ 1.1
TMEM78-201ENST00000323223 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
TMEM78-201ENST00000323223 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.09
TMEM78-201ENST00000323223 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
TMEM78-201ENST00000323223 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
TMEM78-201ENST00000323223 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
TMEM78-201ENST00000323223 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
TMEM78-201ENST00000323223 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
TMEM78-201ENST00000323223 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
TMEM78-201ENST00000323223 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
TMEM78-201ENST00000323223 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
TMEM78-201ENST00000323223 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
TMEM78-201ENST00000323223 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
TMEM78-201ENST00000323223 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms