RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
RPGRIP1-202ENST00000400017 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
RPGRIP1-202ENST00000400017 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
RPGRIP1-202ENST00000400017 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
RPGRIP1-202ENST00000400017 PCGF6Q9BYE7 350 aa22.27■■□□□ 1.16
RPGRIP1-202ENST00000400017 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
RPGRIP1-202ENST00000400017 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
RPGRIP1-202ENST00000400017 HRCP23327 699 aa22.06■■□□□ 1.12
RPGRIP1-202ENST00000400017 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
RPGRIP1-202ENST00000400017 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
RPGRIP1-202ENST00000400017 PPARGC1BQ86YN6 1023 aaKnown RBP21.87■■□□□ 1.09
RPGRIP1-202ENST00000400017 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
RPGRIP1-202ENST00000400017 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
RPGRIP1-202ENST00000400017 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
RPGRIP1-202ENST00000400017 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
RPGRIP1-202ENST00000400017 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
RPGRIP1-202ENST00000400017 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
RPGRIP1-202ENST00000400017 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
RPGRIP1-202ENST00000400017 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
RPGRIP1-202ENST00000400017 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
RPGRIP1-202ENST00000400017 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
RPGRIP1-202ENST00000400017 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.94
RPGRIP1-202ENST00000400017 ABCC9O60706 1549 aa20.89■□□□□ 0.93
RPGRIP1-202ENST00000400017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.85■□□□□ 0.93
RPGRIP1-202ENST00000400017 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
RPGRIP1-202ENST00000400017 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
RPGRIP1-202ENST00000400017 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
RPGRIP1-202ENST00000400017 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
RPGRIP1-202ENST00000400017 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
RPGRIP1-202ENST00000400017 RANGAP1P46060 587 aaPredicted RBP20.52■□□□□ 0.87
RPGRIP1-202ENST00000400017 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
RPGRIP1-202ENST00000400017 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
RPGRIP1-202ENST00000400017 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
RPGRIP1-202ENST00000400017 WIZO95785 1651 aa20.39■□□□□ 0.85
RPGRIP1-202ENST00000400017 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
RPGRIP1-202ENST00000400017 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
RPGRIP1-202ENST00000400017 NACADO15069 1562 aa20.35■□□□□ 0.85
RPGRIP1-202ENST00000400017 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
RPGRIP1-202ENST00000400017 APLP2Q06481 763 aa20.31■□□□□ 0.84
RPGRIP1-202ENST00000400017 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
RPGRIP1-202ENST00000400017 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
RPGRIP1-202ENST00000400017 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
RPGRIP1-202ENST00000400017 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
RPGRIP1-202ENST00000400017 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
RPGRIP1-202ENST00000400017 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
RPGRIP1-202ENST00000400017 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
RPGRIP1-202ENST00000400017 SOGA1O94964 1423 aa20.18■□□□□ 0.82
RPGRIP1-202ENST00000400017 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
RPGRIP1-202ENST00000400017 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
RPGRIP1-202ENST00000400017 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
RPGRIP1-202ENST00000400017 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
RPGRIP1-202ENST00000400017 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
RPGRIP1-202ENST00000400017 MIER1Q8N108 512 aa19.91■□□□□ 0.78
RPGRIP1-202ENST00000400017 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
RPGRIP1-202ENST00000400017 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
RPGRIP1-202ENST00000400017 ITGAEP38570 1179 aa19.9■□□□□ 0.78
RPGRIP1-202ENST00000400017 EEA1Q15075 1411 aa19.87■□□□□ 0.77
RPGRIP1-202ENST00000400017 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
RPGRIP1-202ENST00000400017 CLIP1P30622 1438 aa19.85■□□□□ 0.77
RPGRIP1-202ENST00000400017 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
RPGRIP1-202ENST00000400017 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
RPGRIP1-202ENST00000400017 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
RPGRIP1-202ENST00000400017 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
RPGRIP1-202ENST00000400017 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
RPGRIP1-202ENST00000400017 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
RPGRIP1-202ENST00000400017 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
RPGRIP1-202ENST00000400017 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
RPGRIP1-202ENST00000400017 SYNJ1O43426 1573 aa19.52■□□□□ 0.72
RPGRIP1-202ENST00000400017 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
RPGRIP1-202ENST00000400017 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
RPGRIP1-202ENST00000400017 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
RPGRIP1-202ENST00000400017 MYT1Q01538 1121 aa19.43■□□□□ 0.7
RPGRIP1-202ENST00000400017 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
RPGRIP1-202ENST00000400017 BCANQ96GW7 911 aa19.4■□□□□ 0.7
RPGRIP1-202ENST00000400017 KIF21BO75037 1637 aa19.38■□□□□ 0.69
RPGRIP1-202ENST00000400017 DHX57Q6P158 1386 aaKnown RBP19.37■□□□□ 0.69
RPGRIP1-202ENST00000400017 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
RPGRIP1-202ENST00000400017 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
RPGRIP1-202ENST00000400017 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
RPGRIP1-202ENST00000400017 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
RPGRIP1-202ENST00000400017 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
RPGRIP1-202ENST00000400017 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
RPGRIP1-202ENST00000400017 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
RPGRIP1-202ENST00000400017 SIN3AQ96ST3 1273 aa19.25■□□□□ 0.67
RPGRIP1-202ENST00000400017 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
RPGRIP1-202ENST00000400017 NEFLP07196 543 aa19.22■□□□□ 0.67
RPGRIP1-202ENST00000400017 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
RPGRIP1-202ENST00000400017 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
RPGRIP1-202ENST00000400017 FKBP8Q14318 412 aa19.16■□□□□ 0.66
RPGRIP1-202ENST00000400017 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
RPGRIP1-202ENST00000400017 TRIM52Q96A61 297 aa19.14■□□□□ 0.66
RPGRIP1-202ENST00000400017 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
RPGRIP1-202ENST00000400017 TOP2BQ02880 1626 aa19.14■□□□□ 0.65
RPGRIP1-202ENST00000400017 CUX2O14529 1486 aa19.13■□□□□ 0.65
RPGRIP1-202ENST00000400017 ANP32CO43423 234 aa19.09■□□□□ 0.65
RPGRIP1-202ENST00000400017 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
RPGRIP1-202ENST00000400017 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
RPGRIP1-202ENST00000400017 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
RPGRIP1-202ENST00000400017 CUX1P39880 1505 aa19.04■□□□□ 0.64
RPGRIP1-202ENST00000400017 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms