RNA–Protein interactions for RNA: ENST00000339534.3

ZCCHC13-201, Transcript of zinc finger CCHC-type containing 13, humanhuman

APPRIS P1 BASIC

Gene ZCCHC13, Length 842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC13-201ENST00000339534 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
ZCCHC13-201ENST00000339534 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
ZCCHC13-201ENST00000339534 ABCC9O60706 1549 aa29.47■■■□□ 2.31
ZCCHC13-201ENST00000339534 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
ZCCHC13-201ENST00000339534 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
ZCCHC13-201ENST00000339534 NACADO15069 1562 aa28.5■■■□□ 2.15
ZCCHC13-201ENST00000339534 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
ZCCHC13-201ENST00000339534 MYO15BQ96JP2 1530 aa28.42■■■□□ 2.14
ZCCHC13-201ENST00000339534 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
ZCCHC13-201ENST00000339534 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
ZCCHC13-201ENST00000339534 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
ZCCHC13-201ENST00000339534 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
ZCCHC13-201ENST00000339534 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
ZCCHC13-201ENST00000339534 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
ZCCHC13-201ENST00000339534 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
ZCCHC13-201ENST00000339534 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
ZCCHC13-201ENST00000339534 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
ZCCHC13-201ENST00000339534 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
ZCCHC13-201ENST00000339534 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.86
ZCCHC13-201ENST00000339534 SMARCA4P51532 1647 aa26.57■■□□□ 1.84
ZCCHC13-201ENST00000339534 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
ZCCHC13-201ENST00000339534 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
ZCCHC13-201ENST00000339534 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
ZCCHC13-201ENST00000339534 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
ZCCHC13-201ENST00000339534 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
ZCCHC13-201ENST00000339534 PEG3Q9GZU2 1588 aa26.3■■□□□ 1.8
ZCCHC13-201ENST00000339534 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
ZCCHC13-201ENST00000339534 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
ZCCHC13-201ENST00000339534 WIZO95785 1651 aa26.19■■□□□ 1.78
ZCCHC13-201ENST00000339534 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
ZCCHC13-201ENST00000339534 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
ZCCHC13-201ENST00000339534 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
ZCCHC13-201ENST00000339534 DNAJC5Q9H3Z4 198 aa25.89■■□□□ 1.74
ZCCHC13-201ENST00000339534 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
ZCCHC13-201ENST00000339534 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
ZCCHC13-201ENST00000339534 NESP48681 1621 aa25.6■■□□□ 1.69
ZCCHC13-201ENST00000339534 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
ZCCHC13-201ENST00000339534 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
ZCCHC13-201ENST00000339534 CFTRP13569 1480 aa25.46■■□□□ 1.67
ZCCHC13-201ENST00000339534 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
ZCCHC13-201ENST00000339534 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
ZCCHC13-201ENST00000339534 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
ZCCHC13-201ENST00000339534 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
ZCCHC13-201ENST00000339534 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
ZCCHC13-201ENST00000339534 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
ZCCHC13-201ENST00000339534 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.61
ZCCHC13-201ENST00000339534 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
ZCCHC13-201ENST00000339534 WDR62O43379 1518 aa25.01■■□□□ 1.59
ZCCHC13-201ENST00000339534 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
ZCCHC13-201ENST00000339534 CUX2O14529 1486 aa24.99■■□□□ 1.59
ZCCHC13-201ENST00000339534 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
ZCCHC13-201ENST00000339534 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
ZCCHC13-201ENST00000339534 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
ZCCHC13-201ENST00000339534 CUX1P39880 1505 aa24.81■■□□□ 1.56
ZCCHC13-201ENST00000339534 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
ZCCHC13-201ENST00000339534 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
ZCCHC13-201ENST00000339534 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
ZCCHC13-201ENST00000339534 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
ZCCHC13-201ENST00000339534 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
ZCCHC13-201ENST00000339534 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.54
ZCCHC13-201ENST00000339534 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
ZCCHC13-201ENST00000339534 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
ZCCHC13-201ENST00000339534 SOGA1O94964 1423 aa24.6■■□□□ 1.53
ZCCHC13-201ENST00000339534 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
ZCCHC13-201ENST00000339534 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
ZCCHC13-201ENST00000339534 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
ZCCHC13-201ENST00000339534 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
ZCCHC13-201ENST00000339534 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
ZCCHC13-201ENST00000339534 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
ZCCHC13-201ENST00000339534 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
ZCCHC13-201ENST00000339534 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
ZCCHC13-201ENST00000339534 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
ZCCHC13-201ENST00000339534 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
ZCCHC13-201ENST00000339534 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
ZCCHC13-201ENST00000339534 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
ZCCHC13-201ENST00000339534 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
ZCCHC13-201ENST00000339534 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
ZCCHC13-201ENST00000339534 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
ZCCHC13-201ENST00000339534 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
ZCCHC13-201ENST00000339534 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
ZCCHC13-201ENST00000339534 IGF1RP08069 1367 aa24.09■■□□□ 1.45
ZCCHC13-201ENST00000339534 CHD1O14646 1710 aa24.08■■□□□ 1.45
ZCCHC13-201ENST00000339534 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
ZCCHC13-201ENST00000339534 FBLN2P98095 1184 aa24.06■■□□□ 1.44
ZCCHC13-201ENST00000339534 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
ZCCHC13-201ENST00000339534 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
ZCCHC13-201ENST00000339534 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
ZCCHC13-201ENST00000339534 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
ZCCHC13-201ENST00000339534 CUL7Q14999 1698 aa23.97■■□□□ 1.43
ZCCHC13-201ENST00000339534 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
ZCCHC13-201ENST00000339534 CARMIL1Q5VZK9 1371 aa23.94■■□□□ 1.42
ZCCHC13-201ENST00000339534 EEA1Q15075 1411 aa23.9■■□□□ 1.42
ZCCHC13-201ENST00000339534 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
ZCCHC13-201ENST00000339534 NUP160Q12769 1436 aa23.85■■□□□ 1.41
ZCCHC13-201ENST00000339534 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
ZCCHC13-201ENST00000339534 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
ZCCHC13-201ENST00000339534 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.41
ZCCHC13-201ENST00000339534 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
ZCCHC13-201ENST00000339534 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
ZCCHC13-201ENST00000339534 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms