RNA–Protein interactions for RNA: ENST00000377648.4

PHF13-201, Transcript of PHD finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF13, Length 3,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF13-201ENST00000377648 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
PHF13-201ENST00000377648 HRCP23327 699 aa22.01■■□□□ 1.11
PHF13-201ENST00000377648 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
PHF13-201ENST00000377648 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
PHF13-201ENST00000377648 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
PHF13-201ENST00000377648 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
PHF13-201ENST00000377648 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
PHF13-201ENST00000377648 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
PHF13-201ENST00000377648 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
PHF13-201ENST00000377648 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
PHF13-201ENST00000377648 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
PHF13-201ENST00000377648 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
PHF13-201ENST00000377648 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
PHF13-201ENST00000377648 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
PHF13-201ENST00000377648 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
PHF13-201ENST00000377648 MYT1Q01538 1121 aa20.56■□□□□ 0.88
PHF13-201ENST00000377648 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
PHF13-201ENST00000377648 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
PHF13-201ENST00000377648 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
PHF13-201ENST00000377648 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
PHF13-201ENST00000377648 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
PHF13-201ENST00000377648 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
PHF13-201ENST00000377648 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
PHF13-201ENST00000377648 GTF3C3Q9Y5Q9 886 aa20.3■□□□□ 0.84
PHF13-201ENST00000377648 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
PHF13-201ENST00000377648 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
PHF13-201ENST00000377648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
PHF13-201ENST00000377648 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
PHF13-201ENST00000377648 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
PHF13-201ENST00000377648 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
PHF13-201ENST00000377648 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
PHF13-201ENST00000377648 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
PHF13-201ENST00000377648 MIER1Q8N108 512 aa19.53■□□□□ 0.72
PHF13-201ENST00000377648 ABCC9O60706 1549 aa19.52■□□□□ 0.72
PHF13-201ENST00000377648 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
PHF13-201ENST00000377648 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
PHF13-201ENST00000377648 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
PHF13-201ENST00000377648 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
PHF13-201ENST00000377648 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
PHF13-201ENST00000377648 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
PHF13-201ENST00000377648 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
PHF13-201ENST00000377648 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
PHF13-201ENST00000377648 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
PHF13-201ENST00000377648 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
PHF13-201ENST00000377648 TSHZ2Q9NRE2 1034 aa19.11■□□□□ 0.65
PHF13-201ENST00000377648 APLP2Q06481 763 aa19.07■□□□□ 0.64
PHF13-201ENST00000377648 BCANQ96GW7 911 aa19.05■□□□□ 0.64
PHF13-201ENST00000377648 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
PHF13-201ENST00000377648 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
PHF13-201ENST00000377648 TNIKQ9UKE5 1360 aa18.99■□□□□ 0.63
PHF13-201ENST00000377648 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
PHF13-201ENST00000377648 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
PHF13-201ENST00000377648 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
PHF13-201ENST00000377648 SOGA1O94964 1423 aa18.9■□□□□ 0.62
PHF13-201ENST00000377648 WIZO95785 1651 aa18.89■□□□□ 0.61
PHF13-201ENST00000377648 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
PHF13-201ENST00000377648 FKBP8Q14318 412 aa18.86■□□□□ 0.61
PHF13-201ENST00000377648 NEFLP07196 543 aa18.85■□□□□ 0.61
PHF13-201ENST00000377648 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
PHF13-201ENST00000377648 ERICH6Q7L0X2 663 aa18.76■□□□□ 0.59
PHF13-201ENST00000377648 EEA1Q15075 1411 aa18.75■□□□□ 0.59
PHF13-201ENST00000377648 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
PHF13-201ENST00000377648 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
PHF13-201ENST00000377648 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
PHF13-201ENST00000377648 CLIP1P30622 1438 aa18.71■□□□□ 0.59
PHF13-201ENST00000377648 ITGAEP38570 1179 aa18.69■□□□□ 0.58
PHF13-201ENST00000377648 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
PHF13-201ENST00000377648 DHX57Q6P158 1386 aaKnown RBP18.63■□□□□ 0.57
PHF13-201ENST00000377648 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
PHF13-201ENST00000377648 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
PHF13-201ENST00000377648 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
PHF13-201ENST00000377648 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
PHF13-201ENST00000377648 CEP164Q9UPV0 1460 aa18.56■□□□□ 0.56
PHF13-201ENST00000377648 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
PHF13-201ENST00000377648 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
PHF13-201ENST00000377648 ANP32CO43423 234 aa18.45■□□□□ 0.54
PHF13-201ENST00000377648 MSH5O43196 834 aa18.44■□□□□ 0.54
PHF13-201ENST00000377648 NACADO15069 1562 aa18.44■□□□□ 0.54
PHF13-201ENST00000377648 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
PHF13-201ENST00000377648 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
PHF13-201ENST00000377648 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
PHF13-201ENST00000377648 IRX6P78412 446 aaPredicted RBP18.4■□□□□ 0.54
PHF13-201ENST00000377648 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
PHF13-201ENST00000377648 KIF21BO75037 1637 aa18.33■□□□□ 0.52
PHF13-201ENST00000377648 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
PHF13-201ENST00000377648 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
PHF13-201ENST00000377648 DEKP35659 375 aaKnown RBP18.3■□□□□ 0.52
PHF13-201ENST00000377648 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
PHF13-201ENST00000377648 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
PHF13-201ENST00000377648 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
PHF13-201ENST00000377648 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHF13-201ENST00000377648 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
PHF13-201ENST00000377648 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
PHF13-201ENST00000377648 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
PHF13-201ENST00000377648 RAB3GAP2Q9H2M9 1393 aa18.24■□□□□ 0.51
PHF13-201ENST00000377648 NBR1Q14596 966 aa18.24■□□□□ 0.51
PHF13-201ENST00000377648 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
PHF13-201ENST00000377648 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.51
PHF13-201ENST00000377648 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
PHF13-201ENST00000377648 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms