RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
PRDM16-208ENST00000514189 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
PRDM16-208ENST00000514189 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
PRDM16-208ENST00000514189 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
PRDM16-208ENST00000514189 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
PRDM16-208ENST00000514189 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
PRDM16-208ENST00000514189 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
PRDM16-208ENST00000514189 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
PRDM16-208ENST00000514189 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
PRDM16-208ENST00000514189 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
PRDM16-208ENST00000514189 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
PRDM16-208ENST00000514189 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
PRDM16-208ENST00000514189 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
PRDM16-208ENST00000514189 APLP2Q06481 763 aa20.23■□□□□ 0.83
PRDM16-208ENST00000514189 HRCP23327 699 aa20.14■□□□□ 0.81
PRDM16-208ENST00000514189 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
PRDM16-208ENST00000514189 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
PRDM16-208ENST00000514189 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
PRDM16-208ENST00000514189 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
PRDM16-208ENST00000514189 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
PRDM16-208ENST00000514189 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
PRDM16-208ENST00000514189 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
PRDM16-208ENST00000514189 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
PRDM16-208ENST00000514189 ABCC9O60706 1549 aa19.83■□□□□ 0.77
PRDM16-208ENST00000514189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
PRDM16-208ENST00000514189 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.74
PRDM16-208ENST00000514189 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
PRDM16-208ENST00000514189 ITGAEP38570 1179 aa19.63■□□□□ 0.73
PRDM16-208ENST00000514189 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
PRDM16-208ENST00000514189 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
PRDM16-208ENST00000514189 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.69
PRDM16-208ENST00000514189 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.68
PRDM16-208ENST00000514189 NEFLP07196 543 aa19.24■□□□□ 0.67
PRDM16-208ENST00000514189 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
PRDM16-208ENST00000514189 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
PRDM16-208ENST00000514189 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
PRDM16-208ENST00000514189 BCANQ96GW7 911 aa19.04■□□□□ 0.64
PRDM16-208ENST00000514189 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
PRDM16-208ENST00000514189 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
PRDM16-208ENST00000514189 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
PRDM16-208ENST00000514189 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
PRDM16-208ENST00000514189 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
PRDM16-208ENST00000514189 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
PRDM16-208ENST00000514189 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
PRDM16-208ENST00000514189 NACADO15069 1562 aa18.78■□□□□ 0.6
PRDM16-208ENST00000514189 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
PRDM16-208ENST00000514189 MYT1Q01538 1121 aa18.74■□□□□ 0.59
PRDM16-208ENST00000514189 P3H3Q8IVL6 736 aa18.73■□□□□ 0.59
PRDM16-208ENST00000514189 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
PRDM16-208ENST00000514189 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
PRDM16-208ENST00000514189 ARID3CA6NKF2 412 aa18.65■□□□□ 0.58
PRDM16-208ENST00000514189 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
PRDM16-208ENST00000514189 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
PRDM16-208ENST00000514189 ZNF326Q5BKZ1 582 aaKnown RBP18.59■□□□□ 0.57
PRDM16-208ENST00000514189 MIER1Q8N108 512 aa18.49■□□□□ 0.55
PRDM16-208ENST00000514189 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
PRDM16-208ENST00000514189 ANP32CO43423 234 aa18.46■□□□□ 0.55
PRDM16-208ENST00000514189 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
PRDM16-208ENST00000514189 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
PRDM16-208ENST00000514189 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
PRDM16-208ENST00000514189 FKBP8Q14318 412 aa18.39■□□□□ 0.53
PRDM16-208ENST00000514189 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
PRDM16-208ENST00000514189 FBLN2P98095 1184 aa18.31■□□□□ 0.52
PRDM16-208ENST00000514189 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
PRDM16-208ENST00000514189 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
PRDM16-208ENST00000514189 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
PRDM16-208ENST00000514189 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
PRDM16-208ENST00000514189 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
PRDM16-208ENST00000514189 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
PRDM16-208ENST00000514189 BCL11AQ9H165 835 aa18.24■□□□□ 0.51
PRDM16-208ENST00000514189 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
PRDM16-208ENST00000514189 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRDM16-208ENST00000514189 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
PRDM16-208ENST00000514189 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
PRDM16-208ENST00000514189 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
PRDM16-208ENST00000514189 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
PRDM16-208ENST00000514189 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
PRDM16-208ENST00000514189 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
PRDM16-208ENST00000514189 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
PRDM16-208ENST00000514189 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
PRDM16-208ENST00000514189 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
PRDM16-208ENST00000514189 CLIP1P30622 1438 aa17.98■□□□□ 0.47
PRDM16-208ENST00000514189 NBR1Q14596 966 aa17.97■□□□□ 0.47
PRDM16-208ENST00000514189 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
PRDM16-208ENST00000514189 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
PRDM16-208ENST00000514189 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
PRDM16-208ENST00000514189 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
PRDM16-208ENST00000514189 ANP32AP39687 249 aaKnown RBP17.86■□□□□ 0.45
PRDM16-208ENST00000514189 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
PRDM16-208ENST00000514189 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
PRDM16-208ENST00000514189 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
PRDM16-208ENST00000514189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRDM16-208ENST00000514189 CCDC136Q96JN2 1154 aa17.83■□□□□ 0.44
PRDM16-208ENST00000514189 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
PRDM16-208ENST00000514189 SOGA1O94964 1423 aa17.81■□□□□ 0.44
PRDM16-208ENST00000514189 WIZO95785 1651 aa17.8■□□□□ 0.44
PRDM16-208ENST00000514189 ARXQ96QS3 562 aa17.75■□□□□ 0.43
PRDM16-208ENST00000514189 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
PRDM16-208ENST00000514189 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
PRDM16-208ENST00000514189 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms