RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
IKBKE-201ENST00000578328 CCDC180Q9P1Z9 1646 aa25.94■■□□□ 1.74
IKBKE-201ENST00000578328 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
IKBKE-201ENST00000578328 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.62
IKBKE-201ENST00000578328 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
IKBKE-201ENST00000578328 DCAF1Q9Y4B6 1507 aa24.75■■□□□ 1.55
IKBKE-201ENST00000578328 ABCC9O60706 1549 aa24.5■■□□□ 1.51
IKBKE-201ENST00000578328 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
IKBKE-201ENST00000578328 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
IKBKE-201ENST00000578328 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
IKBKE-201ENST00000578328 NACADO15069 1562 aa24.12■■□□□ 1.45
IKBKE-201ENST00000578328 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
IKBKE-201ENST00000578328 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
IKBKE-201ENST00000578328 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
IKBKE-201ENST00000578328 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
IKBKE-201ENST00000578328 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
IKBKE-201ENST00000578328 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
IKBKE-201ENST00000578328 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
IKBKE-201ENST00000578328 WIZO95785 1651 aa23.21■■□□□ 1.31
IKBKE-201ENST00000578328 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.31
IKBKE-201ENST00000578328 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
IKBKE-201ENST00000578328 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
IKBKE-201ENST00000578328 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
IKBKE-201ENST00000578328 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
IKBKE-201ENST00000578328 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
IKBKE-201ENST00000578328 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
IKBKE-201ENST00000578328 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
IKBKE-201ENST00000578328 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
IKBKE-201ENST00000578328 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
IKBKE-201ENST00000578328 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
IKBKE-201ENST00000578328 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
IKBKE-201ENST00000578328 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
IKBKE-201ENST00000578328 ABCC8Q09428 1581 aa22.44■■□□□ 1.18
IKBKE-201ENST00000578328 HRCP23327 699 aa22.39■■□□□ 1.17
IKBKE-201ENST00000578328 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
IKBKE-201ENST00000578328 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
IKBKE-201ENST00000578328 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
IKBKE-201ENST00000578328 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
IKBKE-201ENST00000578328 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
IKBKE-201ENST00000578328 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
IKBKE-201ENST00000578328 SOGA1O94964 1423 aa22.11■■□□□ 1.13
IKBKE-201ENST00000578328 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
IKBKE-201ENST00000578328 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
IKBKE-201ENST00000578328 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
IKBKE-201ENST00000578328 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
IKBKE-201ENST00000578328 CFTRP13569 1480 aa21.95■■□□□ 1.1
IKBKE-201ENST00000578328 EEA1Q15075 1411 aa21.92■■□□□ 1.1
IKBKE-201ENST00000578328 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
IKBKE-201ENST00000578328 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
IKBKE-201ENST00000578328 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
IKBKE-201ENST00000578328 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
IKBKE-201ENST00000578328 CUX1P39880 1505 aa21.79■■□□□ 1.08
IKBKE-201ENST00000578328 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
IKBKE-201ENST00000578328 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
IKBKE-201ENST00000578328 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
IKBKE-201ENST00000578328 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
IKBKE-201ENST00000578328 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
IKBKE-201ENST00000578328 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
IKBKE-201ENST00000578328 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
IKBKE-201ENST00000578328 KIF21BO75037 1637 aa21.64■■□□□ 1.06
IKBKE-201ENST00000578328 NESP48681 1621 aa21.64■■□□□ 1.05
IKBKE-201ENST00000578328 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
IKBKE-201ENST00000578328 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
IKBKE-201ENST00000578328 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
IKBKE-201ENST00000578328 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
IKBKE-201ENST00000578328 RANGAP1P46060 587 aaPredicted RBP21.5■■□□□ 1.03
IKBKE-201ENST00000578328 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
IKBKE-201ENST00000578328 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
IKBKE-201ENST00000578328 CUX2O14529 1486 aa21.46■■□□□ 1.03
IKBKE-201ENST00000578328 CLIP1P30622 1438 aa21.45■■□□□ 1.02
IKBKE-201ENST00000578328 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
IKBKE-201ENST00000578328 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
IKBKE-201ENST00000578328 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
IKBKE-201ENST00000578328 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
IKBKE-201ENST00000578328 IGF1RP08069 1367 aa21.37■■□□□ 1.01
IKBKE-201ENST00000578328 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
IKBKE-201ENST00000578328 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
IKBKE-201ENST00000578328 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
IKBKE-201ENST00000578328 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
IKBKE-201ENST00000578328 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
IKBKE-201ENST00000578328 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
IKBKE-201ENST00000578328 CARMIL1Q5VZK9 1371 aa21.27■□□□□ 0.99
IKBKE-201ENST00000578328 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
IKBKE-201ENST00000578328 APLP2Q06481 763 aa21.17■□□□□ 0.98
IKBKE-201ENST00000578328 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
IKBKE-201ENST00000578328 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
IKBKE-201ENST00000578328 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
IKBKE-201ENST00000578328 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
IKBKE-201ENST00000578328 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
IKBKE-201ENST00000578328 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
IKBKE-201ENST00000578328 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
IKBKE-201ENST00000578328 CUL7Q14999 1698 aa21.04■□□□□ 0.96
IKBKE-201ENST00000578328 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
IKBKE-201ENST00000578328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
IKBKE-201ENST00000578328 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
IKBKE-201ENST00000578328 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
IKBKE-201ENST00000578328 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
IKBKE-201ENST00000578328 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
IKBKE-201ENST00000578328 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.94
IKBKE-201ENST00000578328 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms